RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 TMUB1Q9BVT8 246 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 GMPR2Q9P2T1 348 aaKnown RBP13.92□□□□□ -0.18
DDX54-204ENST00000546898 RIMS3Q9UJD0 308 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 MTORP42345 2549 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 C2CD3Q4AC94 2353 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 USF3Q68DE3 2245 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 SHISA9B4DS77 424 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 M0R1B8 84 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 SHOX2O60902 331 aaPredicted RBP13.91□□□□□ -0.18
DDX54-204ENST00000546898 HIST1H2ABP04908 130 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 IFNW1P05000 195 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 ASAH2BP0C7U1 165 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 DANCRP0C864 163 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 UMPSP11172 480 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 HLA-DOBP13765 273 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 CD99P14209 185 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 AHCYP23526 432 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 UGT2B15P54855 530 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 UBE2NP61088 152 aaKnown RBP13.91□□□□□ -0.18
DDX54-204ENST00000546898 RPS4XP62701 263 aaKnown RBP13.91□□□□□ -0.18
DDX54-204ENST00000546898 ST3GAL3Q11203 375 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 HIKESHIQ53FT3 197 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 ANKRD16Q6P6B7 361 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 PRSS57Q6UWY2 283 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 NHLRC1Q6VVB1 395 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 HIST3H2AQ7L7L0 130 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 SLC46A3Q7Z3Q1 461 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 NANOGNBQ7Z5D8 188 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 KRTAP1-3Q8IUG1 177 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 NKAIN4Q8IVV8 208 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 DEPDC4Q8N2C3 294 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
DDX54-204ENST00000546898 TMEM239Q8WW34 195 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 GEMIN6Q8WXD5 167 aaKnown RBP13.91□□□□□ -0.18
DDX54-204ENST00000546898 BCL2L2Q92843 193 aaPredicted RBP13.91□□□□□ -0.18
DDX54-204ENST00000546898 HIST1H2ACQ93077 130 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 ADAD1Q96M93 576 aaKnown RBP13.91□□□□□ -0.18
DDX54-204ENST00000546898 LRRC37BQ96QE4 947 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 NELFAQ9H3P2 528 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 GPR35Q9HC97 309 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 B3GAT2Q9NPZ5 323 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 MEPEQ9NQ76 525 aaPredicted RBP13.91□□□□□ -0.18
DDX54-204ENST00000546898 FAIMQ9NVQ4 179 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 MED29Q9NX70 200 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 CISD1Q9NZ45 108 aaKnown RBP13.91□□□□□ -0.18
DDX54-204ENST00000546898 VPS13CQ709C8 3753 aa13.91□□□□□ -0.18
DDX54-204ENST00000546898 SLC35F4A4IF30 521 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 HTR3EA5X5Y0 456 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 ZNF726A6NNF4 738 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 ZNF682O95780 498 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 PTH2RP49190 550 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 RIPPLY3P57055 190 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 FOXD4Q12950 439 aaPredicted RBP13.9□□□□□ -0.18
DDX54-204ENST00000546898 CEACAM16Q2WEN9 425 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 IFI44LQ53G44 452 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 Q5PR19 223 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 VTCN1Q7Z7D3 282 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 C20orf196Q8IYI0 205 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 OFCC1Q8IZS5 231 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 WFDC11Q8NEX6 87 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 SMAP2Q8WU79 429 aaPredicted RBP13.9□□□□□ -0.18
DDX54-204ENST00000546898 TMEM255BQ8WV15 326 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 NEUROG1Q92886 237 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 FAM162AQ96A26 154 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 SGTBQ96EQ0 304 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 GRIP2Q9C0E4 1043 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 CRLF2Q9HC73 371 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 ZNF701Q9NV72 531 aaPredicted RBP13.9□□□□□ -0.18
DDX54-204ENST00000546898 TAS2R5Q9NYW4 299 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 A4GNTQ9UNA3 340 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 LAMP3Q9UQV4 416 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 MED31Q9Y3C7 131 aa13.9□□□□□ -0.18
DDX54-204ENST00000546898 ZNF99A8MXY4 864 aaPredicted RBP13.89□□□□□ -0.19
DDX54-204ENST00000546898 C11orf98E9PRG8 122 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 RNF13O43567 381 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 SERPINI2O75830 405 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 OR7A10O76100 309 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 SERPINA1P01009 418 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 ARF1P84077 181 aaKnown RBP13.89□□□□□ -0.19
DDX54-204ENST00000546898 C3orf36Q3SXR2 165 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 SLC22A25Q6T423 547 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 SLC35D2Q76EJ3 337 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 LRRC17Q8N6Y2 441 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 ANKS4BQ8N8V4 417 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 OR6X1Q8NH79 312 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 PFN4Q8NHR9 129 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 LIPHQ8WWY8 451 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 PERPQ96FX8 193 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 TXNDC15Q96J42 360 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 HSH2DQ96JZ2 352 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 EMC6Q9BV81 110 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 TAGLN3Q9UI15 199 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 RPS6KA6Q9UK32 745 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 POU2F3Q9UKI9 436 aa13.89□□□□□ -0.19
DDX54-204ENST00000546898 M0R3G1 203 aa13.88□□□□□ -0.19
DDX54-204ENST00000546898 SOD3P08294 240 aa13.88□□□□□ -0.19
DDX54-204ENST00000546898 IFNGR1P15260 489 aa13.88□□□□□ -0.19
DDX54-204ENST00000546898 FOSL1P15407 271 aa13.88□□□□□ -0.19
DDX54-204ENST00000546898 FUT1P19526 365 aa13.88□□□□□ -0.19
DDX54-204ENST00000546898 CSNK1A1P48729 337 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms