RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 VANGL1Q8TAA9 524 aaPredicted RBP13.39□□□□□ -0.27
SSH1-204ENST00000546697 ADAD1Q96M93 576 aaKnown RBP13.39□□□□□ -0.27
SSH1-204ENST00000546697 HS6ST2Q96MM7 605 aa13.39□□□□□ -0.27
SSH1-204ENST00000546697 TRAF4Q9BUZ4 470 aaPredicted RBP13.39□□□□□ -0.27
SSH1-204ENST00000546697 NSRP1Q9H0G5 558 aaKnown RBP13.39□□□□□ -0.27
SSH1-204ENST00000546697 ALG2Q9H553 416 aa13.39□□□□□ -0.27
SSH1-204ENST00000546697 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
SSH1-204ENST00000546697 RIMS3Q9UJD0 308 aa13.39□□□□□ -0.27
SSH1-204ENST00000546697 A4GNTQ9UNA3 340 aa13.39□□□□□ -0.27
SSH1-204ENST00000546697 USF3Q68DE3 2245 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 CENPBD1B2RD01 187 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 LRRN3E7EW58 273 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 CLOCKO15516 846 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 SLC7A2P52569 658 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 ROR2Q01974 943 aaKnown RBP13.38□□□□□ -0.27
SSH1-204ENST00000546697 PMS2P3Q13401 168 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 C1DQ13901 141 aaKnown RBP13.38□□□□□ -0.27
SSH1-204ENST00000546697 Q5PR19 223 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 ZNF544Q6NX49 715 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 ANKS4BQ8N8V4 417 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 NEUROG1Q92886 237 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 PRRC1Q96M27 445 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 DHRS9Q9BPW9 319 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 NANSQ9NR45 359 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 FAIMQ9NVQ4 179 aa13.38□□□□□ -0.27
SSH1-204ENST00000546697 CISD1Q9NZ45 108 aaKnown RBP13.38□□□□□ -0.27
SSH1-204ENST00000546697 SLC35F4A4IF30 521 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 ZNF99A8MXY4 864 aaPredicted RBP13.37□□□□□ -0.27
SSH1-204ENST00000546697 E7EQL1 145 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 PRSS23O95084 383 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 NQO1P15559 274 aaKnown RBP13.37□□□□□ -0.27
SSH1-204ENST00000546697 GSK3BP49841 420 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 ZNF133P52736 654 aaPredicted RBP13.37□□□□□ -0.27
SSH1-204ENST00000546697 CDH11P55287 796 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 POU3F1Q03052 451 aaPredicted RBP13.37□□□□□ -0.27
SSH1-204ENST00000546697 PIN1Q13526 163 aaPredicted RBP13.37□□□□□ -0.27
SSH1-204ENST00000546697 HIST3H3Q16695 136 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 HIKESHIQ53FT3 197 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 HMBOX1Q6NT76 420 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 NKAIN4Q8IVV8 208 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 WDFY1Q8IWB7 410 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 OFCC1Q8IZS5 231 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 FAM156AQ8NDB6 213 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 LZICQ8WZA0 190 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 ZNF837Q96EG3 531 aaPredicted RBP13.37□□□□□ -0.27
SSH1-204ENST00000546697 COX4I2Q96KJ9 171 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 KATNB1Q9BVA0 655 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 DENND2DQ9H6A0 471 aaPredicted RBP13.37□□□□□ -0.27
SSH1-204ENST00000546697 CRLF2Q9HC73 371 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 MAN2C1Q9NTJ4 1040 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 B3GNT2Q9NY97 397 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 LAMP3Q9UQV4 416 aa13.37□□□□□ -0.27
SSH1-204ENST00000546697 IGHV1-18A0A0C4DH31 117 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 CXCR6O00574 342 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 KRT33AO76009 404 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 CH25HO95992 272 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 CBR1P16152 277 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 TNFRSF1BP20333 461 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 TTKP33981 857 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 ZNF83P51522 516 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 UGT2B15P54855 530 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 RIPPLY3P57055 190 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 ST3GAL3Q11203 375 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 CEACAM16Q2WEN9 425 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 NRN1LQ496H8 165 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 LRRC23Q53EV4 343 aaPredicted RBP13.36□□□□□ -0.27
SSH1-204ENST00000546697 PHYHD1Q5SRE7 291 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 C9orf135Q5VTT2 229 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 KLHL24Q6TFL4 600 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 B3GLCTQ6Y288 498 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 GPR137CQ8N3F9 429 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 TMEM239Q8WW34 195 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 GEMIN6Q8WXD5 167 aaKnown RBP13.36□□□□□ -0.27
SSH1-204ENST00000546697 TMEM54Q969K7 222 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 GTPBP3Q969Y2 492 aaKnown RBP13.36□□□□□ -0.27
SSH1-204ENST00000546697 TXNDC15Q96J42 360 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 C18orf12Q96KH6 178 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 ZNF75AQ96N20 296 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 SLC38A2Q96QD8 506 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 MRPL13Q9BYD1 178 aaKnown RBP13.36□□□□□ -0.27
SSH1-204ENST00000546697 ANKRD19PQ9H560 264 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 SPAG4Q9NPE6 437 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 MED29Q9NX70 200 aa13.36□□□□□ -0.27
SSH1-204ENST00000546697 GMPR2Q9P2T1 348 aaKnown RBP13.36□□□□□ -0.27
SSH1-204ENST00000546697 A0A1W2PR80 420 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 FFAR1O14842 300 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 OR7A10O76100 309 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 ADORA3P0DMS8 318 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 CBLP22681 906 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 OR1E2P47887 323 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 NUDT2P50583 147 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 TAS2R41P59536 307 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 PSME3P61289 254 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 ARF1P84077 181 aaKnown RBP13.35□□□□□ -0.27
SSH1-204ENST00000546697 SPOCK1Q08629 439 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 ANKDD1AQ495B1 522 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 SPATS1Q496A3 300 aa13.35□□□□□ -0.27
SSH1-204ENST00000546697 TSEN54Q7Z6J9 526 aaKnown RBP13.35□□□□□ -0.27
SSH1-204ENST00000546697 YTHDF3Q7Z739 585 aaKnown RBP13.35□□□□□ -0.27
SSH1-204ENST00000546697 CPLX4Q7Z7G2 160 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms