RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 SLC22A10Q63ZE4 541 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 ASPGQ86U10 573 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 MARCH3Q86UD3 253 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 ARMC10Q8N2F6 343 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF485Q8NCK3 441 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 PAQR8Q8TEZ7 354 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 CMBLQ96DG6 245 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 PGLYRP3Q96LB9 341 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 MS4A4EQ96PG1 132 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF649Q9BS31 505 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 WDR76Q9H967 626 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 GPN1Q9HCN4 374 aaPredicted RBP13.41□□□□□ -0.26
HOXC11-202ENST00000546378 MED11Q9P086 117 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 DTX4Q9Y2E6 619 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 PRR32B1ATL7 298 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 GPR31O00270 319 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 DCTN6O00399 190 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 CLEC3AO75596 197 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 GNALP38405 381 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 ART1P52961 327 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 CEBPGP53567 150 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 BTG1P62324 171 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 LTBQ06643 244 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 HLXQ14774 488 aaPredicted RBP13.41□□□□□ -0.26
HOXC11-202ENST00000546378 KIAA1211LQ6NV74 962 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 LRRTM1Q86UE6 522 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 PDZD9Q8IXQ8 264 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 OR4C16Q8NGL9 310 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 CYYR1Q96J86 154 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 PRSS27Q9BQR3 290 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 SYT4Q9H2B2 425 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 TREM1Q9NP99 234 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 FLRT3Q9NZU0 649 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 LAMP5Q9UJQ1 280 aa13.41□□□□□ -0.26
HOXC11-202ENST00000546378 DISC1C4P0D8 188 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 BHLHE40O14503 412 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 PIN1P1O15428 100 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 SUSD5O60279 629 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 GLAP06280 429 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 S100A11P31949 105 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 NRG3P56975 720 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 KIRREL2Q6UWL6 708 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF546Q86UE3 836 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 GPALPP1Q8IXQ4 340 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 BEST3Q8N1M1 668 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 KISS1RQ969F8 398 aaPredicted RBP13.4□□□□□ -0.26
HOXC11-202ENST00000546378 ZC3HAV1LQ96H79 300 aaKnown RBP13.4□□□□□ -0.26
HOXC11-202ENST00000546378 TSNAXQ99598 290 aaKnown RBP13.4□□□□□ -0.26
HOXC11-202ENST00000546378 SOSTQ9BQB4 213 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 TRPV4Q9HBA0 871 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 CMC2Q9NRP2 79 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 CALML5Q9NZT1 146 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 OR5V1Q9UGF6 321 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 ZNF879B4DU55 563 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 SLC33A1O00400 549 aaPredicted RBP13.4□□□□□ -0.26
HOXC11-202ENST00000546378 SDC3O75056 442 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 SULT1A3P0DMM9 295 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 SULT1A4P0DMN0 295 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 VSIG10L2P0DP72 767 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 SLC6A6P31641 620 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 CDK5R1Q15078 307 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 OR4C3Q8NH37 302 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 TRIM2Q9C040 744 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 MKL2Q9ULH7 1088 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 KLHDC2Q9Y2U9 406 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 MTCL1Q9Y4B5 1905 aaKnown RBP13.4□□□□□ -0.26
HOXC11-202ENST00000546378 IFITM5A6NNB3 132 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 APBB3O95704 486 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 TAS2R20P59543 309 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 METTL11BQ5VVY1 283 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 TMEM200AQ86VY9 491 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 NRIP3Q9NQ35 241 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 DIABLOQ9NR28 239 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 GSKIPQ9P0R6 139 aa13.4□□□□□ -0.26
HOXC11-202ENST00000546378 SERTM1A2A2V5 107 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 F5H5P2 479 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 VEGFDO43915 354 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 CDC40O60508 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
HOXC11-202ENST00000546378 IGHA1P01876 353 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 PEBP1P30086 187 aaKnown RBP13.39□□□□□ -0.27
HOXC11-202ENST00000546378 AVPR2P30518 371 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 LTBRP36941 435 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 SEC61A1P61619 476 aaKnown RBP13.39□□□□□ -0.27
HOXC11-202ENST00000546378 RBM39Q14498 530 aaKnown RBP13.39□□□□□ -0.27
HOXC11-202ENST00000546378 PRAMEF17Q5VTA0 474 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 OR5AK2Q8NH90 309 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 TINAGL1Q9GZM7 467 aaPredicted RBP13.39□□□□□ -0.27
HOXC11-202ENST00000546378 SLC6A15Q9H2J7 730 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 PIAS3Q9Y6X2 628 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 DENND4CQ5VZ89 1909 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 OR2AT4A6NND4 320 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 TO15178 435 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 SHOXO15266 292 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 TRIM3O75382 744 aaPredicted RBP13.39□□□□□ -0.27
HOXC11-202ENST00000546378 DCNP07585 359 aaKnown RBP13.39□□□□□ -0.27
HOXC11-202ENST00000546378 NMBP08949 121 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 HOXD4P09016 255 aaPredicted RBP13.39□□□□□ -0.27
HOXC11-202ENST00000546378 MAOAP21397 527 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 ITGA3P26006 1051 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 TPMTP51580 245 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms