RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 HIF3AQ9Y2N7 669 aa13.91□□□□□ -0.18
CNN3-207ENST00000545882 PCDHGA5Q9Y5G8 931 aa13.91□□□□□ -0.18
CNN3-207ENST00000545882 MYO9BQ13459 2157 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 LOC105371267A0A1B0GV96 52 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 PRAMEF2O60811 474 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 TMEM127O75204 238 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 IFNA7P01567 189 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 RAB40ALP0C0E4 278 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 RNH1P13489 461 aaKnown RBP13.9□□□□□ -0.18
CNN3-207ENST00000545882 MNDAP41218 407 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 DHODHQ02127 395 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 EGR4Q05215 589 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 FUT7Q11130 342 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 HTR4Q13639 388 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 CD226Q15762 336 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 GRK1Q15835 563 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 CSRP2Q16527 193 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 SMUG1Q53HV7 270 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 TMEM69Q5SWH9 247 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 DNM1P46Q6ZS02 220 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 ATG4DQ86TL0 474 aaPredicted RBP13.9□□□□□ -0.18
CNN3-207ENST00000545882 CDC20BQ86Y33 519 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 MCATQ8IVS2 390 aaKnown RBP13.9□□□□□ -0.18
CNN3-207ENST00000545882 OR6V1Q8N148 313 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 SPICQ8N5J4 248 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 ZNF615Q8N8J6 731 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 GATSQ8NAP1 163 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 DNAAF1Q8NEP3 725 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 C1orf216Q8TAB5 229 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 LIPHQ8WWY8 451 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 RAB40AQ8WXH6 277 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 ADAD1Q96M93 576 aaKnown RBP13.9□□□□□ -0.18
CNN3-207ENST00000545882 KLHDC3Q9BQ90 382 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 SLC19A3Q9BZV2 496 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 OR10A5Q9H207 317 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 CLEC4MQ9H2X3 399 aaPredicted RBP13.9□□□□□ -0.18
CNN3-207ENST00000545882 PRTFDC1Q9NRG1 225 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 UBQLN2Q9UHD9 624 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 CD14P08571 375 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 ANXA7P20073 488 aaKnown RBP13.9□□□□□ -0.18
CNN3-207ENST00000545882 MAOAP21397 527 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 MST1P26927 711 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 SOX2P48431 317 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 TAS2R20P59543 309 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 AP3S2P59780 193 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 RPL6Q02878 288 aaKnown RBP13.9□□□□□ -0.18
CNN3-207ENST00000545882 DMWDQ09019 674 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 EIF2B5Q13144 721 aaKnown RBP13.9□□□□□ -0.18
CNN3-207ENST00000545882 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.9□□□□□ -0.18
CNN3-207ENST00000545882 TCTE1Q5JU00 501 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 SLC25A25Q6KCM7 469 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 COMMD7Q86VX2 200 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 ZNF595Q8IYB9 648 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 LSM14AQ8ND56 463 aaKnown RBP13.9□□□□□ -0.18
CNN3-207ENST00000545882 OR5AK2Q8NH90 309 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 THEM6Q8WUY1 208 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 DGAT2Q96PD7 388 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 CHIAQ9BZP6 476 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 MGAT4CQ9UBM8 478 aa13.9□□□□□ -0.18
CNN3-207ENST00000545882 PCNX3Q9H6A9 2034 aa13.9□□□□□ -0.19
CNN3-207ENST00000545882 CACNA1IQ9P0X4 2223 aa13.9□□□□□ -0.19
CNN3-207ENST00000545882 TRAV8-7A0A075B6U6 113 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 KIR2DS5A0A0G2JLQ3 304 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 A0A0G2JNG1 304 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 OR2M5A3KFT3 312 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 ELOA3DA6NLF2 546 aaPredicted RBP13.89□□□□□ -0.19
CNN3-207ENST00000545882 C10orf142B7Z368 130 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 KIR2DS3K7RE56 304 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 SCO1O75880 301 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 CXCL2P19875 107 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 M6PRP20645 277 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 HOXD11P31277 338 aaPredicted RBP13.89□□□□□ -0.19
CNN3-207ENST00000545882 AKT2P31751 481 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 MECP2P51608 486 aaKnown RBP13.89□□□□□ -0.19
CNN3-207ENST00000545882 ART1P52961 327 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 CTXN1P60606 82 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 KIR2DS5Q14953 304 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 AANATQ16613 207 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 ELOA3BQ3SY89 546 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 CBLN3Q6UW01 205 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 OOSP2Q86WS3 158 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 C19orf47Q8N9M1 422 aaKnown RBP13.89□□□□□ -0.19
CNN3-207ENST00000545882 ELOA3Q8NG57 546 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 OR10AC1Q8NH08 325 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 SRA1Q9HD15 236 aaKnown RBP13.89□□□□□ -0.19
CNN3-207ENST00000545882 MMP25Q9NPA2 562 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 TAS2R5Q9NYW4 299 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 OR10H1Q9Y4A9 318 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 HS3ST3A1Q9Y663 406 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 FKBP7Q9Y680 259 aa13.89□□□□□ -0.19
CNN3-207ENST00000545882 PLSCR5A0PG75 271 aa13.88□□□□□ -0.19
CNN3-207ENST00000545882 TVP23AA6NH52 213 aa13.88□□□□□ -0.19
CNN3-207ENST00000545882 OR4C45A6NMZ5 311 aa13.88□□□□□ -0.19
CNN3-207ENST00000545882 H7C1C5 153 aa13.88□□□□□ -0.19
CNN3-207ENST00000545882 GLSO94925 669 aaPredicted RBP13.88□□□□□ -0.19
CNN3-207ENST00000545882 IGF2P01344 180 aa13.88□□□□□ -0.19
CNN3-207ENST00000545882 F13BP05160 661 aa13.88□□□□□ -0.19
CNN3-207ENST00000545882 TACSTD2P09758 323 aa13.88□□□□□ -0.19
CNN3-207ENST00000545882 ASAH2BP0C7U1 165 aa13.88□□□□□ -0.19
CNN3-207ENST00000545882 IFNGR1P15260 489 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms