RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ASCL3Q9NQ33 180 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 STOX2Q9P2F5 926 aaPredicted RBP2.54□□□□□ -2
SNHG1-224ENST00000545688 WDR45Q9Y484 360 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 LRP4O75096 1905 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 RP1L1Q8IWN7 2480 aaPredicted RBP2.53□□□□□ -2
SNHG1-224ENST00000545688 PDZD2O15018 2839 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.53□□□□□ -2
SNHG1-224ENST00000545688 A0A0U1RRA0 63 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 A0A1B0GTQ1 180 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 A0A1W2PRV1 198 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 TTC26A0AVF1 554 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 K7N7A8 449 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 SLC37A4O43826 429 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 AQP1P29972 269 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 GNA11P29992 359 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 HPDP32754 393 aaPredicted RBP2.53□□□□□ -2
SNHG1-224ENST00000545688 NAMPTP43490 491 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 SSTP61278 116 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 HERVK_113P63132 956 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 ERVK-8P63133 956 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 SLC7A9P82251 487 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 CCDC173Q0VFZ6 552 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 SMARCB1Q12824 385 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 PPP1R8Q12972 351 aaKnown RBP2.53□□□□□ -2
SNHG1-224ENST00000545688 ILKQ13418 452 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 TSTA3Q13630 321 aaPredicted RBP2.53□□□□□ -2
SNHG1-224ENST00000545688 HES3Q5TGS1 186 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 SLC39A4Q6P5W5 647 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 FAM220AQ7Z4H9 259 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 LINC01551Q86U37 167 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 ZNF429Q86V71 674 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 LCA5Q86VQ0 697 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 UNC45BQ8IWX7 931 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 SFRP1Q8N474 314 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 C2orf15Q8WU43 125 aaKnown RBP2.53□□□□□ -2
SNHG1-224ENST00000545688 ADIPOR1Q96A54 375 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 CYP2S1Q96SQ9 504 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 PKMYT1Q99640 499 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 LXNQ9BS40 222 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 ERVK-6Q9BXR3 956 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 POLR3FQ9H1D9 316 aaPredicted RBP2.53□□□□□ -2
SNHG1-224ENST00000545688 C2orf40Q9H1Z8 148 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 C6orf50Q9HD87 102 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 SH2D2AQ9NP31 389 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 MED13Q9UHV7 2174 aa2.53□□□□□ -2
SNHG1-224ENST00000545688 APCP25054 2843 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 IGLV4-69A0A075B6H9 119 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 A8MUA0 341 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 PIRO00625 290 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 ALOX15BO15296 676 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 FAM189A1O60320 539 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 AKR7A3O95154 331 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 APODP05090 189 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 CD5P06127 495 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 CISD3P0C7P0 127 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 CHMLP26374 656 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 SLC6A8P48029 635 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 IFNAR2P48551 515 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 CSNK1EP49674 416 aaKnown RBP2.52□□□□□ -2.01
SNHG1-224ENST00000545688 LHX2P50458 406 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 RPL8P62917 257 aaKnown RBP2.52□□□□□ -2.01
SNHG1-224ENST00000545688 DNAJC3Q13217 504 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 HFEQ30201 348 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 TOR1AIP1Q5JTV8 583 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 TSPO2Q5TGU0 170 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 CASC1Q6TDU7 716 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 LYPD1Q8N2G4 141 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 OR2T33Q8NG76 320 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 SPPL2BQ8TCT7 592 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 CCDC12Q8WUD4 166 aaPredicted RBP2.52□□□□□ -2.01
SNHG1-224ENST00000545688 TRUB1Q8WWH5 349 aaKnown RBP2.52□□□□□ -2.01
SNHG1-224ENST00000545688 ARHGDIGQ99819 225 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 CHIAQ9BZP6 476 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 ZDHHC4Q9NPG8 344 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 PHF11Q9UIL8 331 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 PCM1Q15154 2024 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 HIVEP3Q5T1R4 2406 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 DENND4CQ5VZ89 1909 aa2.52□□□□□ -2.01
SNHG1-224ENST00000545688 ZNF469Q96JG9 3925 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-224ENST00000545688 NUMA1Q14980 2115 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 CCDC168Q8NDH2 2452 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 TRIP11Q15643 1979 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 CEP192Q8TEP8 1941 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 TRAV19A0A0A6YYK7 116 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 KIR2DL5BA0A0G2JN68 375 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 KIR2DL5BA0A0G2JPC4 375 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 LRRIQ4A6NIV6 560 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 H0YL77 283 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 CACNG3O60359 315 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 GIMD1P0DJR0 217 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 MCF2P10911 925 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 SFTPCP11686 197 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 GCFC2P16383 781 aaKnown RBP2.51□□□□□ -2.01
SNHG1-224ENST00000545688 TNFSF9P41273 254 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 TPMTP51580 245 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 HNRNPFP52597 415 aaKnown RBP2.51□□□□□ -2.01
SNHG1-224ENST00000545688 CARTPTQ16568 116 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 DNAJC21Q5F1R6 531 aaKnown RBP2.51□□□□□ -2.01
SNHG1-224ENST00000545688 ATF7IP2Q5U623 682 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 PVRIGQ6DKI7 326 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms