RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 LRRC37A5PQ49AS3 106 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SLC25A30Q5SVS4 291 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 LAIR2Q6ISS4 152 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 FCRLAQ7L513 359 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SLC16A9Q7RTY1 509 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SIAH3Q8IW03 269 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SERPINA12Q8IW75 414 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 FOXRED2Q8IWF2 684 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 CRIPAKQ8N1N5 446 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SLC37A2Q8TED4 501 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 PHYHIPQ92561 330 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SLC6A18Q96N87 628 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 NOX3Q9HBY0 568 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 NOX4Q9NPH5 578 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 B3GAT2Q9NPZ5 323 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ETV7Q9Y603 341 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 OR6C65A6NJZ3 312 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 B4DXG7 233 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ZNF208O43345 1280 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 HRO43593 1189 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 GCM2O75603 506 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 EFEMP2O95967 443 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SRMP19623 302 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 TUBG1P23258 451 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 CDK2P24941 298 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 GDNFP39905 211 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 LIMS1P48059 325 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SRP9P49458 86 aaKnown RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 SSTP61278 116 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ALKBH1Q13686 389 aaKnown RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 GPR176Q14439 515 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 MFSD13AQ14CX5 517 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 CLPPQ16740 277 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 Q499Y3 187 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 FAM69BQ5VUD6 431 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 NKAIN2Q5VXU1 208 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 MTFR2Q6P444 385 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 PXKQ7Z7A4 578 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 GPAT4Q86UL3 456 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 GLB1L2Q8IW92 636 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 LNX2Q8N448 690 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ZNF784Q8NCA9 323 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 SMAP2Q8WU79 429 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 LCORQ96JN0 433 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 MRGPRX1Q96LB2 322 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SLC46A1Q96NT5 459 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 CCNL2Q96S94 520 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 ADOQ96SZ5 270 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 C20orf85Q9H1P6 137 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 GALNT9Q9HCQ5 603 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ACOXLQ9NUZ1 547 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 C2orf42Q9NWW7 574 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 IL20Q9NYY1 176 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 TRAV36DV7A0A075B6V5 113 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 TRAV18A0A075B6X5 111 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ACOD1A6NK06 481 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 H7C1C5 153 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 MEN1O00255 615 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 TXNL1O43396 289 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ERCC1P07992 297 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 HIST1H1CP16403 213 aaKnown RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 PBX2P40425 430 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 GLP1RP43220 463 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 EVX1P49640 407 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 HCCSP53701 268 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 LCN6P62502 163 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SELENBP1Q13228 472 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 CDNFQ49AH0 187 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 C14orf28Q4W4Y0 310 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 TIGD3Q6B0B8 471 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 MRM1Q6IN84 353 aaKnown RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 ZNF425Q6IV72 752 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 LRFN4Q6PJG9 635 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ZNF704Q6ZNC4 412 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 UEVLDQ8IX04 471 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ESX1Q8N693 406 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SCGB1C1Q8TD33 95 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 C10orf90Q96M02 699 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 ARPC5LQ9BPX5 153 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 SULT4A1Q9BR01 284 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 FBXL3Q9UKT7 428 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 RCE1Q9Y256 329 aa5.32□□□□□ -1.56
VPS50-220ENST00000544910 RPH3AQ9Y2J0 694 aaPredicted RBP5.32□□□□□ -1.56
VPS50-220ENST00000544910 SMLR1H3BR10 107 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 TP53I11O14683 189 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 HCRTR1O43613 425 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 SLC22A5O76082 557 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 LALBAP00709 142 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 IFNA5P01569 189 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 OR8G3PP0DMU2 310 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 GABRB1P18505 474 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 CHATP28329 748 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 TAS2R31P59538 309 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 GLO1Q04760 184 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 SHHQ15465 462 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 APOOLQ6UXV4 268 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 CFAP77Q6ZQR2 320 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 ZNF283Q8N7M2 679 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 CCDC54Q8NEL0 328 aa5.31□□□□□ -1.56
VPS50-220ENST00000544910 RADILQ96JH8 1075 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms