RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ZNF726A6NNF4 738 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MCIDASD6RGH6 385 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 H0YHG0 523 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MSTNO14793 375 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 NDUFB2O95178 105 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CGAP01215 116 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 IGHV3-9P01782 118 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TSPAN19P0C672 248 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CD8BP10966 210 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ANXA8P13928 327 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GSTM3P21266 225 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 NTF4P34130 210 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 BIDP55957 195 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CTXN1P60606 82 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MELKQ14680 651 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CDSNQ15517 529 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SMARCD3Q6STE5 483 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CLEC18BQ6UXF7 455 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TFAP2EQ6VUC0 442 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SLC35D2Q76EJ3 337 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZDHHC13Q8IUH4 622 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 UBE2J2Q8N2K1 259 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ATG16L2Q8NAA4 619 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CLEC18CQ8NCF0 446 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 LRRC46Q96FV0 321 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TXNDC15Q96J42 360 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 EMC6Q9BV81 110 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 DGCR6LQ9BY27 220 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OR52D1Q9H346 318 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 IL20RAQ9UHF4 553 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SLC35F4A4IF30 521 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 PTP4A3O75365 173 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 KRT33AO76009 404 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 BCL10O95999 233 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ADAP00813 363 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 OR3A2P47893 321 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SELENOPP49908 381 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ASCL1P50553 236 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 DAP3P51398 398 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ELF3P78545 371 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 TOP3AQ13472 1001 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 FHL1Q13642 323 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CARD17Q5XLA6 110 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 BEND4Q6ZU67 534 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SVOPLQ8N434 492 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 NIPSNAP1Q9BPW8 284 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 POLDIP3Q9BY77 421 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 UPB1Q9UBR1 384 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 PRSS50Q9UI38 385 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RCE1Q9Y256 329 aa12.83□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SAC3D1A6NKF1 404 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 A8MXE2 369 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 EDNRAP25101 427 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ACKR1Q16570 336 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RPL13AP3Q6NVV1 102 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ZNF620Q6ZNG0 422 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RASSF6Q6ZTQ3 369 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 PQLC1Q8N2U9 271 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 LRRC75AQ8NAA5 344 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 OR52L1Q8NGH7 329 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ADAD1Q96M93 576 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 KATNB1Q9BVA0 655 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RBM24Q9BX46 236 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SLCO5A1Q9H2Y9 848 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 TXNIPQ9H3M7 391 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 EGLN3Q9H6Z9 239 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 JKAMPQ9P055 326 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 GRHPRQ9UBQ7 328 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 OAZ3Q9UMX2 235 aa12.82□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SLC43A1O75387 559 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SOX14O95416 240 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CD14P08571 375 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ZNF26P17031 533 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SLC6A6P31641 620 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 FXYD6P3P58550 94 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ERVK-25P63136 954 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 COX10Q12887 443 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CAMK2DQ13557 499 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RCN1Q15293 331 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RFX4Q33E94 735 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 FBXW9Q5XUX1 488 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 THSD4Q6ZMP0 1018 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 HDDC2Q7Z4H3 204 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ASB10Q8WXI3 467 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SAMD8Q96LT4 415 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 OR2M2Q96R28 347 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 IFT27Q9BW83 186 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ENKD1Q9H0I2 346 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 TBC1D23Q9NUY8 699 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ZNF346Q9UL40 294 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CDH10Q9Y6N8 788 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 FREM1Q5H8C1 2179 aa12.81□□□□□ -0.36
TNFRSF1A-216ENST00000543995 OR6C65A6NJZ3 312 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 H3BN98 237 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ZNF432O94892 652 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 PPP1R3DO95685 299 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 IGHMP01871 453 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RPS6KA3P51812 740 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CLRN1P58418 232 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RPL27P61353 136 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms