RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 PRSS50Q9UI38 385 aa12.07□□□□□ -0.48
SP140-213ENST00000543928 SIGLEC7Q9Y286 467 aa12.07□□□□□ -0.48
SP140-213ENST00000543928 A0A1W2PRG6 482 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 A1L4Q6 167 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 AKAP8O43823 692 aaKnown RBP12.06□□□□□ -0.48
SP140-213ENST00000543928 PTP4A3O75365 173 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 IGHV3-9P01782 118 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 POU2F1P14859 743 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 GSSP48637 474 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 SELENOPP49908 381 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 ARHGDIAP52565 204 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 PRPS1P60891 318 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 TFF3Q07654 80 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 TSPAN31Q12999 210 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 FBXL19-AS1Q494R0 122 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 HMBOX1Q6NT76 420 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 NIPAL3Q6P499 406 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 SHQ1Q6PI26 577 aaKnown RBP12.06□□□□□ -0.48
SP140-213ENST00000543928 SLC35D2Q76EJ3 337 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 AMIGO2Q86SJ2 522 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 HS3ST5Q8IZT8 346 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 BDH2Q9BUT1 245 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 RBM24Q9BX46 236 aaKnown RBP12.06□□□□□ -0.48
SP140-213ENST00000543928 S100A14Q9HCY8 104 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 RCE1Q9Y256 329 aa12.06□□□□□ -0.48
SP140-213ENST00000543928 SLC35F4A4IF30 521 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 ARRDC5A6NEK1 342 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 ZNF432O94892 652 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 NDUFB2O95178 105 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 CLDN1O95832 211 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 ZNF26P17031 533 aaPredicted RBP12.05□□□□□ -0.48
SP140-213ENST00000543928 RPL4P36578 427 aaKnown RBP12.05□□□□□ -0.48
SP140-213ENST00000543928 BIDP55957 195 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 CTXN1P60606 82 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 MELKQ14680 651 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 TAF11Q15544 211 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 FBXW9Q5XUX1 488 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 BEND4Q6ZU67 534 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 IGFN1Q86VF2 1251 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 WDFY1Q8IWB7 410 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 UBE2J2Q8N2K1 259 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 LRRC75AQ8NAA5 344 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 FANK1Q8TC84 345 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 STMN2Q93045 179 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 RNASE6Q93091 150 aaKnown RBP12.05□□□□□ -0.48
SP140-213ENST00000543928 GTPBP3Q969Y2 492 aaKnown RBP12.05□□□□□ -0.48
SP140-213ENST00000543928 NRBF2Q96F24 287 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 LRRC46Q96FV0 321 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 CENPNQ96H22 339 aaPredicted RBP12.05□□□□□ -0.48
SP140-213ENST00000543928 FEVQ99581 238 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 PKP2Q99959 881 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 EMC6Q9BV81 110 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 DGCR6LQ9BY27 220 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 NDEL1Q9GZM8 345 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 SEMA6AQ9H2E6 1030 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 SLCO5A1Q9H2Y9 848 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 GALNT8Q9NY28 637 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 MGAT4BQ9UQ53 548 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 MAGED1Q9Y5V3 778 aaPredicted RBP12.05□□□□□ -0.48
SP140-213ENST00000543928 KLF2Q9Y5W3 355 aaPredicted RBP12.05□□□□□ -0.48
SP140-213ENST00000543928 ICE1Q9Y2F5 2266 aa12.05□□□□□ -0.48
SP140-213ENST00000543928 USP9YO00507 2555 aaPredicted RBP12.04□□□□□ -0.48
SP140-213ENST00000543928 ZNF726A6NNF4 738 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 MCIDASD6RGH6 385 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 PRSS44E7EML9 344 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 C19orf84I3L1E1 186 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 SLC43A1O75387 559 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 BCL10O95999 233 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 PRKACGP22612 351 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 GRNP28799 593 aaKnown RBP12.04□□□□□ -0.48
SP140-213ENST00000543928 DAP3P51398 398 aaKnown RBP12.04□□□□□ -0.48
SP140-213ENST00000543928 FXYD6P3P58550 94 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 LGALS3BPQ08380 585 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 TOP3AQ13472 1001 aaPredicted RBP12.04□□□□□ -0.48
SP140-213ENST00000543928 CAMK2DQ13557 499 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 ACKR1Q16570 336 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 TSPO2Q5TGU0 170 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 CARD17Q5XLA6 110 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 SMARCD3Q6STE5 483 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 THSD4Q6ZMP0 1018 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 TMEM123Q8N131 208 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 OR5K1Q8NHB7 308 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 ADAD1Q96M93 576 aaKnown RBP12.04□□□□□ -0.48
SP140-213ENST00000543928 OR2M2Q96R28 347 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 NIPSNAP1Q9BPW8 284 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 POLDIP3Q9BY77 421 aaKnown RBP12.04□□□□□ -0.48
SP140-213ENST00000543928 ENKD1Q9H0I2 346 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 OR52D1Q9H346 318 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 TXNIPQ9H3M7 391 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 NPDC1Q9NQX5 325 aaPredicted RBP12.04□□□□□ -0.48
SP140-213ENST00000543928 SLC7A10Q9NS82 523 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 ELOVL5Q9NYP7 299 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 UPB1Q9UBR1 384 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 IL20RAQ9UHF4 553 aa12.04□□□□□ -0.48
SP140-213ENST00000543928 FOXD3Q9UJU5 478 aaPredicted RBP12.04□□□□□ -0.48
SP140-213ENST00000543928 HCFC1P51610 2035 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 NPIPB13A6NJU9 1138 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 OR6C65A6NJZ3 312 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 NPIPB4C9JG80 1138 aa12.03□□□□□ -0.48
SP140-213ENST00000543928 G3V2T6 193 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms