RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 TNFSF18Q9UNG2 199 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 OR2F2O95006 317 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 PAPLNO95428 1278 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 AKAIN1P0CW23 69 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 CTNNB1P35222 781 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 ACTR1BP42025 376 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 FRKP42685 505 aaPredicted RBP11.61□□□□□ -0.55
SMG8-202ENST00000543872 ECH1Q13011 328 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 OR2F1Q13607 317 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 PON3Q15166 354 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 MPPED2Q15777 294 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 OR4C11Q6IEV9 310 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 C3orf33Q6P1S2 294 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 FIGNL1Q6PIW4 674 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 UBE3DQ7Z6J8 389 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 SLC35F2Q8IXU6 374 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 OR1J2Q8NGS2 313 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 HSPA12BQ96MM6 686 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 C6orf106Q9H6K1 298 aaPredicted RBP11.61□□□□□ -0.55
SMG8-202ENST00000543872 MARCH5Q9NX47 278 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 WDR45Q9Y484 360 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 A0A0B4J2A0 478 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 CPED1A4D0V7 1026 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 TRAPPC13A5PLN9 417 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 H7C4K7 107 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 IMPA2O14732 288 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 CKBP12277 381 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 ABCD3P28288 659 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 CD34P28906 385 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 EIF2S3P41091 472 aaKnown RBP11.6□□□□□ -0.55
SMG8-202ENST00000543872 MECP2P51608 486 aaKnown RBP11.6□□□□□ -0.55
SMG8-202ENST00000543872 DCDP81605 110 aaKnown RBP11.6□□□□□ -0.55
SMG8-202ENST00000543872 HTRA4P83105 476 aaPredicted RBP11.6□□□□□ -0.55
SMG8-202ENST00000543872 ACOT7LQ6ZUV0 252 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 OR51D1Q8NGF3 324 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 CDS1Q92903 461 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 SLC35A4Q96G79 324 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 CLCC1Q96S66 551 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 NCDNQ9UBB6 729 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 SHPKQ9UHJ6 478 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 ATG4BQ9Y4P1 393 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 SCN3AQ9NY46 2000 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 RNF222A6NCQ9 220 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 COLCA2A8K830 154 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 ZFPL1O95159 310 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 EPCAMP16422 314 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 LAP3P28838 519 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 EFNB2P52799 333 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 RNF4P78317 190 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 GFOD2Q3B7J2 385 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 KRBOX4Q5JUW0 171 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 STEAP1BQ6NZ63 245 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 ENPP7Q6UWV6 458 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 STAC2Q6ZMT1 411 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 KCTD9Q7L273 389 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 MISPQ8IVT2 679 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 DND1Q8IYX4 353 aaKnown RBP11.6□□□□□ -0.55
SMG8-202ENST00000543872 CASTOR1Q8WTX7 329 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 CCDC107Q8WV48 283 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 NAA11Q9BSU3 229 aaPredicted RBP11.6□□□□□ -0.55
SMG8-202ENST00000543872 OR2S2Q9NQN1 319 aa11.6□□□□□ -0.55
SMG8-202ENST00000543872 ZNF443Q9Y2A4 671 aaPredicted RBP11.6□□□□□ -0.55
SMG8-202ENST00000543872 C5orf52A6NGY3 159 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 LEFTY1O75610 366 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 AMY2AP04746 511 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 LAMP2P13473 410 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 DDX6P26196 483 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMG8-202ENST00000543872 CASRP41180 1078 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 AIMP2Q13155 320 aaKnown RBP11.59□□□□□ -0.55
SMG8-202ENST00000543872 ANKRD39Q53RE8 183 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 ZNF793Q6ZN11 406 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 RHOUQ7L0Q8 258 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 OR4A4PQ8NGN8 299 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 CNN2Q99439 309 aaKnown RBP11.59□□□□□ -0.55
SMG8-202ENST00000543872 PRSS27Q9BQR3 290 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 PPIL1Q9Y3C6 166 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 SCN2AQ99250 2005 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 A0A1B0GTH9 108 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 WASH3PC4AMC7 463 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 K7ESM1 405 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 CSF1P09603 554 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 ZNF44P15621 663 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 MNDAP41218 407 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 PRKXP51817 358 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 NANOS3P60323 173 aaKnown RBP11.59□□□□□ -0.55
SMG8-202ENST00000543872 SKP2Q13309 424 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 CLINT1Q14677 625 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 ELAVL1Q15717 326 aaKnown RBP11.59□□□□□ -0.55
SMG8-202ENST00000543872 ZNF836Q6ZNA1 936 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 PCSK9Q8NBP7 692 aaKnown RBP11.59□□□□□ -0.55
SMG8-202ENST00000543872 MRPL38Q96DV4 380 aaKnown RBP11.59□□□□□ -0.55
SMG8-202ENST00000543872 TMEM41AQ96HV5 264 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 CMTM3Q96MX0 182 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 SSX3Q99909 188 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 SELENOIQ9C0D9 397 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 ZMAT3Q9HA38 289 aaKnown RBP11.59□□□□□ -0.55
SMG8-202ENST00000543872 CAPN10Q9HC96 672 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 ZNF281Q9Y2X9 895 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 C13orf42A0A1B0GVH6 325 aa11.59□□□□□ -0.55
SMG8-202ENST00000543872 A0A1W2PR48 441 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms