RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 B3GLCTQ6Y288 498 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 B3GNT6Q6ZMB0 384 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 GTF2IRD2Q86UP8 949 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 SATL1Q86VE3 508 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 SLC22A16Q86VW1 577 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 FAM109AQ8N4B1 249 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 STX19Q8N4C7 294 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 FAR1Q8WVX9 515 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 ASB10Q8WXI3 467 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 RFKQ969G6 155 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 MUL1Q969V5 352 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 TMIGD2Q96BF3 282 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 OTULINQ96BN8 352 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 ZDHHC11Q9H8X9 412 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 FGF20Q9NP95 211 aaPredicted RBP11.87□□□□□ -0.51
CHFR-221ENST00000542714 BATF3Q9NR55 127 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 GRHPRQ9UBQ7 328 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHFR-221ENST00000542714 EXOGQ9Y2C4 368 aaKnown RBP11.87□□□□□ -0.51
CHFR-221ENST00000542714 PCDHGB1Q9Y5G3 927 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 SNX5Q9Y5X3 404 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 SPTBN4Q9H254 2564 aa11.87□□□□□ -0.51
CHFR-221ENST00000542714 ZNF407Q9C0G0 2248 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 IGHV3-15A0A0B4J1V0 119 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 A0A1W2PRG6 482 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 NPIPB13A6NJU9 1138 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 NPIPB4C9JG80 1138 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 LINC01387J3KSC0 135 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 EIF1AYO14602 144 aaKnown RBP11.86□□□□□ -0.51
CHFR-221ENST00000542714 RRP8O43159 456 aaKnown RBP11.86□□□□□ -0.51
CHFR-221ENST00000542714 SEC14L5O43304 696 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 TRAF3IP2O43734 574 aaPredicted RBP11.86□□□□□ -0.51
CHFR-221ENST00000542714 FADS2O95864 444 aaKnown RBP11.86□□□□□ -0.51
CHFR-221ENST00000542714 IFNGR1P15260 489 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 SPI1P17947 270 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 PAICSP22234 425 aaKnown RBP11.86□□□□□ -0.51
CHFR-221ENST00000542714 ACVR1BP36896 505 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 MTNR1AP48039 350 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 SLC25A1P53007 311 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 CLDN18P56856 261 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 POU3F1Q03052 451 aaPredicted RBP11.86□□□□□ -0.51
CHFR-221ENST00000542714 RUNX1T1Q06455 604 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 DOC2BQ14184 412 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 TBR1Q16650 682 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 KLHL12Q53G59 568 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 ESPNLQ6ZVH7 1005 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 ASB18Q6ZVZ8 466 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 SHFQ7M4L6 423 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 PXKQ7Z7A4 578 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 JAZF1Q86VZ6 243 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 ZADH2Q8N4Q0 377 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 OR4F15Q8NGB8 312 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 OR2V1Q8NHB1 315 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 TMEM80Q96HE8 168 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 TXNDC15Q96J42 360 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 UCN2Q96RP3 112 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 CDCA4Q9BXL8 241 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 OR51V1Q9H2C8 321 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 ACKR4Q9NPB9 350 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 ACOT13Q9NPJ3 140 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 ASB6Q9NWX5 421 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 H2AFY2Q9P0M6 372 aaPredicted RBP11.86□□□□□ -0.51
CHFR-221ENST00000542714 WARS2Q9UGM6 360 aaKnown RBP11.86□□□□□ -0.51
CHFR-221ENST00000542714 DIMT1Q9UNQ2 313 aaKnown RBP11.86□□□□□ -0.51
CHFR-221ENST00000542714 COMMD3-BMI1R4GMX3 469 aa11.86□□□□□ -0.51
CHFR-221ENST00000542714 LOC102725191A0A1B0GVB3 256 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 SNTNA6NMZ2 147 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 J3QRE1 110 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 ACOT7O00154 380 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 TAF4O00268 1085 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 DCTN6O00399 190 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 SMAD9O15198 467 aaKnown RBP11.85□□□□□ -0.51
CHFR-221ENST00000542714 DNPH1O43598 174 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 GSTT1P30711 240 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 AGFG1P52594 562 aaKnown RBP11.85□□□□□ -0.51
CHFR-221ENST00000542714 GP2P55259 537 aaKnown RBP11.85□□□□□ -0.51
CHFR-221ENST00000542714 CSNK2A1P68400 391 aaPredicted RBP11.85□□□□□ -0.51
CHFR-221ENST00000542714 RAB40BQ12829 278 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 TMED1Q13445 227 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 ZNF169Q14929 603 aaPredicted RBP11.85□□□□□ -0.51
CHFR-221ENST00000542714 SLC10A1Q14973 349 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 TBCEQ15813 527 aaPredicted RBP11.85□□□□□ -0.51
CHFR-221ENST00000542714 KLHL22Q53GT1 634 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 FOXB2Q5VYV0 432 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 HBMQ6B0K9 141 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 BORAQ6PGQ7 559 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 Q6ZS92 163 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 SLC35D2Q76EJ3 337 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 ADCK1Q86TW2 530 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 PM20D2Q8IYS1 436 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 UBQLNLQ8IYU4 475 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 SVOPQ8N4V2 548 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 RBMXL3Q8N7X1 1067 aaKnown RBP11.85□□□□□ -0.51
CHFR-221ENST00000542714 OXGR1Q96P68 337 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 TSSK2Q96PF2 358 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 SNX18Q96RF0 628 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 TEAD3Q99594 435 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 DEFB127Q9H1M4 99 aa11.85□□□□□ -0.51
CHFR-221ENST00000542714 RPRD1BQ9NQG5 326 aaKnown RBP11.85□□□□□ -0.51
CHFR-221ENST00000542714 MED29Q9NX70 200 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms