RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 LCP2Q13094 533 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 SRSF5Q13243 272 aaKnown RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 NAE1Q13564 534 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 GPR176Q14439 515 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF345Q14585 488 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 USF2Q15853 346 aaPredicted RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 NTRK2Q16620 822 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 GSG1Q2KHT4 349 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 ALG11Q2TAA5 492 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 NDUFAF6Q330K2 333 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF585BQ52M93 769 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 ELFN2Q5R3F8 820 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 FAM182AQ5T1J6 154 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 ARMC12Q5T9G4 340 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TMEM244Q5VVB8 128 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TBC1D3GQ6DHY5 549 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 OR2T5Q6IEZ7 315 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TBC1D3CQ6IPX1 549 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 H3F3CQ6NXT2 135 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 CNIH2Q6PI25 160 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TMUB2Q71RG4 321 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 ARMCX2Q7L311 632 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 HIST3H2AQ7L7L0 130 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 RANBP3LQ86VV4 465 aaPredicted RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 KCNMB4Q86W47 210 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 UNC93AQ86WB7 457 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 CEP97Q8IW35 865 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TBC1D3Q8IZP1 549 aaPredicted RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 OR6V1Q8N148 313 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 OR2C3Q8N628 320 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 EID2Q8N6I1 236 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 COLGALT1Q8NBJ5 622 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 OR5T3Q8NGG3 340 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 OR2D3Q8NGH3 330 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 OR2T29Q8NH02 315 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 RPLP0P6Q8NHW5 317 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TRMT10AQ8TBZ6 339 aaKnown RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 NEK7Q8TDX7 302 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 GGHQ92820 318 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 DNASE1L2Q92874 299 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 HIST1H2ACQ93077 130 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 ARL11Q969Q4 196 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 NT5C3BQ969T7 300 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TM4SF18Q96CE8 201 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 FAM210BQ96KR6 192 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 C12orf42Q96LP6 360 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 MS4A4EQ96PG1 132 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 EPYCQ99645 322 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 RIOK2Q9BVS4 552 aaKnown RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TEX12Q9BXU0 123 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 ELOVL4Q9GZR5 314 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 FZD8Q9H461 694 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 CHST11Q9NPF2 352 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 KRCC1Q9NPI7 259 aaPredicted RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 FSCN3Q9NQT6 498 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF302Q9NR11 478 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 DCAF13Q9NV06 445 aaKnown RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 AIG1Q9NVV5 245 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 PLEKHB1Q9UF11 243 aaPredicted RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 IL19Q9UHD0 177 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 SIX4Q9UIU6 781 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 UBQLN1Q9UMX0 589 aaKnown RBP5.3□□□□□ -1.56
XRCC4-206ENST00000542685 PROCRQ9UNN8 238 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 LAMP3Q9UQV4 416 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 SLC9A8Q9Y2E8 581 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 TMED3Q9Y3Q3 217 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 PATJQ8NI35 1801 aa5.3□□□□□ -1.56
XRCC4-206ENST00000542685 PAPPA2Q9BXP8 1791 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 MYLKQ15746 1914 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 LOC102723532A0A0G2JNH3 316 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ELOVL7A1L3X0 281 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 OR2M5A3KFT3 312 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ANKRD61A6NGH8 418 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 AGAP14A8MT82 685 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 PRR23D1E9PI22 279 aaPredicted RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 M0R143 59 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 RHODO00212 210 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 GPR31O00270 319 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ACKR2O00590 384 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 TP53I11O14683 189 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 MBTPS2O43462 519 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 NUDT21O43809 227 aaKnown RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 GMFGO60234 142 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 TPST2O60704 377 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ICOSLGO75144 302 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 KAT7O95251 611 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 DIRAS3O95661 229 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 C6orf47O95873 294 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 PTHP01270 115 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 ALDOCP09972 364 aaKnown RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 PRR23D2P0DMB1 279 aaPredicted RBP5.29□□□□□ -1.56
XRCC4-206ENST00000542685 CXCL2P19875 107 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 HTR2CP28335 458 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 MPIP34949 423 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 TNFSF9P41273 254 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 CRYBB2P43320 205 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 MAPK9P45984 424 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 BDKRB1P46663 353 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 RFX3P48380 749 aa5.29□□□□□ -1.56
XRCC4-206ENST00000542685 STK19P49842 368 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms