RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RPLP0P6Q8NHW5 317 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ZPLD1Q8TCW7 415 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC37A2Q8TED4 501 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 GIMAP1Q8WWP7 306 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 RIT1Q92963 219 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 NINJ1Q92982 152 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 PHF21AQ96BD5 680 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 HSPA12BQ96MM6 686 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF578Q96N58 590 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 NMNAT3Q96T66 252 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 PDCD1LG2Q9BQ51 273 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 TTTY10Q9BZA0 68 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 C20orf85Q9H1P6 137 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 IGFLR1Q9H665 355 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 AUNIPQ9H7T9 357 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 HRASLSQ9HDD0 168 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 GPR27Q9NS67 375 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 STARD5Q9NSY2 213 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 AKAP7Q9P0M2 348 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 LRIT1Q9P2V4 623 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 EIF3KQ9UBQ5 218 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 RPS6KB2Q9UBS0 482 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 TEKT2Q9UIF3 430 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 SCP2D1Q9UJQ7 156 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 GNG8Q9UK08 70 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF222Q9UK12 451 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 POMT2Q9UKY4 750 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 MOKQ9UQ07 419 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 HIF3AQ9Y2N7 669 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 MRPS7Q9Y2R9 242 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC6A5Q9Y345 797 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 MTCH2Q9Y6C9 303 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 CACNA1IQ9P0X4 2223 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 GOLGA4Q13439 2230 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 NCOR1O75376 2440 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 TRBV5-5A0A0J9YX44 114 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 A0A1B0GUH1 482 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 RPS10-NUDT3A0A1W2PQS6 291 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ANKRD20A5PA0PJZ0 165 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 FAM181BA6NEQ2 426 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 IDSB3KWA1 339 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 PRAMEF2O60811 474 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 UPK3AO75631 287 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 KRT33AO76009 404 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ZFPL1O95159 310 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 LDOC1O95751 146 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 CSTAP01040 98 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 TNFP01375 233 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 SYPP08247 313 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 GSTP1P09211 210 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 RAB40ALP0C0E4 278 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 RNH1P13489 461 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ST6GAL1P15907 406 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 PSMB1P20618 241 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 CFPP27918 469 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 PSMB10P40306 273 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 CDKN2AP42771 156 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 RABIFP47224 123 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 SMCPP49901 116 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 TPMTP51580 245 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ARPC4P59998 168 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ERVK-25P63136 954 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 MRPS10P82664 201 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 MRPS21P82921 87 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 TFF2Q03403 129 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF74Q16587 644 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 CLLU1Q5K131 121 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 STPG1Q5TH74 334 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 SIGIRRQ6IA17 410 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 VHLLQ6RSH7 139 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC16A9Q7RTY1 509 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 NUP54Q7Z3B4 507 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ATG4DQ86TL0 474 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 LRRTM1Q86UE6 522 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 MCATQ8IVS2 390 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 SFTPA2Q8IWL1 248 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ELMOD2Q8IZ81 293 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF614Q8N883 585 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 BCORP1Q8N888 145 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF615Q8N8J6 731 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 UXS1Q8NBZ7 420 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 OR8H1Q8NGG4 311 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 OR4C3Q8NH37 302 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 OR52I2Q8NH67 350 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 MOSPD2Q8NHP6 518 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF671Q8TAW3 534 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ADAMTS18Q8TE60 1221 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 RAB40AQ8WXH6 277 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 NSMAFQ92636 917 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 RASD2Q96D21 266 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF837Q96EG3 531 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF285Q96NJ3 590 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 CCDC3Q9BQI4 270 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ALG12Q9BV10 488 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF436Q9C0F3 470 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 S1PR5Q9H228 398 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 TCEAL2Q9H3H9 227 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 CERS4Q9HA82 394 aa4.73□□□□□ -1.65
ATPAF1-212ENST00000542495 Q9N2J8 555 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms