RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 SLC35A4Q96G79 324 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 NARS2Q96I59 477 aaKnown RBP8.35□□□□□ -1.07
THBS3-211ENST00000541990 NKX3-1Q99801 234 aaPredicted RBP8.35□□□□□ -1.07
THBS3-211ENST00000541990 AIF1LQ9BQI0 150 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 UQCC2Q9BRT2 126 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 TEX12Q9BXU0 123 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 CHST6Q9GZX3 395 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 ZNF304Q9HCX3 659 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 TAS2R5Q9NYW4 299 aa8.35□□□□□ -1.07
THBS3-211ENST00000541990 ZNF230Q9UIE0 474 aaPredicted RBP8.35□□□□□ -1.07
THBS3-211ENST00000541990 ZNF223Q9UK11 482 aaPredicted RBP8.35□□□□□ -1.07
THBS3-211ENST00000541990 CTSVO60911 334 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 APBB3O95704 486 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 F3P13726 295 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 HOXB1P14653 301 aaPredicted RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 CPN1P15169 458 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 SLC2A5P22732 501 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 DPP4P27487 766 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 CERS1P27544 350 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 GRPRP30550 384 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 NTSP30990 170 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 REEP5Q00765 189 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 ID2Q02363 134 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 CDK5R1Q15078 307 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 AMZ1Q400G9 498 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 B3GNTL1Q67FW5 361 aaPredicted RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 FRRS1Q6ZNA5 592 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 BRIX1Q8TDN6 353 aaKnown RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 CDS1Q92903 461 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 PELOQ9BRX2 385 aaKnown RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 TMPRSS13Q9BYE2 586 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 MRPS30Q9NP92 439 aaKnown RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 KLHL9Q9P2J3 617 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 GLS2Q9UI32 602 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 ZNF443Q9Y2A4 671 aaPredicted RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 MRPS17Q9Y2R5 130 aaKnown RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 MRPS2Q9Y399 296 aaKnown RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 ASCC3Q8N3C0 2202 aaKnown RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 MDC1Q14676 2089 aaKnown RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 ANKRD20A5PA0PJZ0 165 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 METTL12A8MUP2 240 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 PRR32B1ATL7 298 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 WDPCPO95876 746 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 TNFP01375 233 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 CDK2P24941 298 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 CD38P28907 300 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 CALCRP30988 508 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 MC2RQ01718 297 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 MLC1Q15049 377 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 BEX5Q5H9J7 111 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 ELFN2Q5R3F8 820 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 CBLN2Q8IUK8 224 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 OR4N5Q8IXE1 308 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 OR6V1Q8N148 313 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 MUC20Q8N307 709 aaPredicted RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 OR2L3Q8NG85 312 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 OR52L1Q8NGH7 329 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 SYNPRQ8TBG9 265 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 PNPLA2Q96AD5 504 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 SMIM19Q96E16 107 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 HS6ST2Q96MM7 605 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 CD180Q99467 661 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 TIMM29Q9BSF4 260 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 TSPAN10Q9H1Z9 355 aaPredicted RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 SLC6A15Q9H2J7 730 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 PLEKHA1Q9HB21 404 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 BARX1Q9HBU1 254 aaPredicted RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 FBXO34Q9NWN3 711 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 HRASLS2Q9NWW9 162 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 EMC3Q9P0I2 261 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 ZNF346Q9UL40 294 aaKnown RBP8.34□□□□□ -1.07
THBS3-211ENST00000541990 FOXJ3Q9UPW0 622 aa8.34□□□□□ -1.07
THBS3-211ENST00000541990 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 TRAV1-2A0A0B4J238 106 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 GABARAPH6UMI1 98 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 RLN1P04808 185 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 MPGP29372 298 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 FLI1Q01543 452 aaPredicted RBP8.33□□□□□ -1.08
THBS3-211ENST00000541990 GUCA2AQ02747 115 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 CBFBQ13951 182 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 KCNAB1Q14722 419 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 ZIC1Q15915 447 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 PABPC1L2AQ5JQF8 200 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 MRM1Q6IN84 353 aaKnown RBP8.33□□□□□ -1.08
THBS3-211ENST00000541990 LNX2Q8N448 690 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 SDR9C7Q8NEX9 313 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 OR10K1Q8NGX5 313 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 RGP1Q92546 391 aaPredicted RBP8.33□□□□□ -1.08
THBS3-211ENST00000541990 GIMAP5Q96F15 307 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 ZNF75AQ96N20 296 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 NKX6-2Q9C056 277 aaPredicted RBP8.33□□□□□ -1.08
THBS3-211ENST00000541990 CHRDQ9H2X0 955 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 KCNK15Q9H427 330 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 FAM60AQ9NP50 221 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 CMC2Q9NRP2 79 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 TAS2R10Q9NYW0 307 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 OR5V1Q9UGF6 321 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 GNG8Q9UK08 70 aa8.33□□□□□ -1.08
THBS3-211ENST00000541990 ZFHX2Q9C0A1 2572 aaPredicted RBP8.33□□□□□ -1.08
THBS3-211ENST00000541990 A6NCN8 305 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms