RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 FN3KQ9H479 309 aa13.1□□□□□ -0.31
SFSWAP-210ENST00000541286 MTHFD2LQ9H903 347 aaPredicted RBP13.1□□□□□ -0.31
SFSWAP-210ENST00000541286 AK6Q9Y3D8 172 aaKnown RBP13.1□□□□□ -0.31
SFSWAP-210ENST00000541286 FKBP7Q9Y680 259 aa13.1□□□□□ -0.31
SFSWAP-210ENST00000541286 IGHV1OR21-1A0A087WYE8 117 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 TRAV20A0A0B4J274 112 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 KIR2DS5A0A0G2JLQ3 304 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 A0A0G2JNG1 304 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 MFSD2BA6NFX1 497 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 DUXAA6NLW8 204 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 KIR2DS3K7RE56 304 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 ZNF593O00488 134 aaPredicted RBP13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 PRKNO60260 465 aaPredicted RBP13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 FZD7O75084 574 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 IGF2P01344 180 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 SLC35G6P0C7Q6 338 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 GABRA3P34903 492 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 MAGEB1P43366 347 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 KIR2DS5Q14953 304 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 ZNF528Q3MIS6 628 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 SFXN4Q6P4A7 337 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 WBP1Q96G27 269 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 HS6ST2Q96MM7 605 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 MESP1Q9BRJ9 268 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 SARGQ9BW04 601 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 SEMA4CQ9C0C4 833 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 KRCC1Q9NPI7 259 aaPredicted RBP13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 POT1Q9NUX5 634 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 SOHLH2Q9NX45 425 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 NCDNQ9UBB6 729 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 CES1P1Q9UKY3 287 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 TPRP12270 2363 aaKnown RBP13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 CDHR4A6H8M9 788 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 G3V3Q6 166 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 SYT5O00445 386 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 GMFGO60234 142 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 NMBP08949 121 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 ANXA7P20073 488 aaKnown RBP13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 CD1CP29017 333 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 PSMB10P40306 273 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 RAD52P43351 418 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 ZNF169Q14929 603 aaPredicted RBP13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 ACSM3Q53FZ2 586 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 SDR9C7Q8NEX9 313 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 SFXN5Q8TD22 340 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 BPIFA2Q96DR5 249 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 PFDN2Q9UHV9 154 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 MRTO4Q9UKD2 239 aaKnown RBP13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 ZNF175Q9Y473 711 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 FER1L5A0AVI2 2057 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 RIIAD1A6NNX1 92 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 HTR2AP28223 471 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 NIPAL3Q6P499 406 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 FIGLAQ6QHK4 219 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 ASPGQ86U10 573 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 OR5J2Q8NH18 312 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 GHSRQ92847 366 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 LRRC46Q96FV0 321 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 ZNF681Q96N22 645 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 MS4A4EQ96PG1 132 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 SDF2Q99470 211 aa13.09□□□□□ -0.31
SFSWAP-210ENST00000541286 ARPC1BO15143 372 aaKnown RBP13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 MT-ND5P03915 603 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 FOXK2Q01167 660 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 PLA2G2CQ5R387 149 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 MRM1Q6IN84 353 aaKnown RBP13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 CD200R1LQ6Q8B3 271 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 VN1R4Q7Z5H5 301 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 OAFQ86UD1 273 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 ZNF485Q8NCK3 441 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 ABHD4Q8TB40 342 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 PTP4A1Q93096 173 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 TNFRSF13CQ96RJ3 184 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 TEAD3Q99594 435 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 NT5DC2Q9H857 520 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 APMAPQ9HDC9 416 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 NTMQ9P121 344 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 MLXQ9UH92 298 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 OR10H1Q9Y4A9 318 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 MEIKINA0A087WXM9 373 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 GXYLT2A0PJZ3 443 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 TRAPPC13A5PLN9 417 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 NDUFA2O43678 99 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 SLC19A2O60779 497 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 RD3LP0DJH9 198 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 CBR1P16152 277 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 TLX1P31314 330 aaPredicted RBP13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 RPL4P36578 427 aaKnown RBP13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 BTG1P62324 171 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 RUNX2Q13950 521 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 CD276Q5ZPR3 534 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 OR52E2Q8NGJ4 325 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 OR6K6Q8NGW6 343 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 OR52N1Q8NH53 320 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 IFI44Q8TCB0 444 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 SMPDL3BQ92485 455 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 ZNF578Q96N58 590 aaPredicted RBP13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 MNTQ99583 582 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 MRPS18AQ9NVS2 196 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms