RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 SEC23BQ15437 767 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 STK11Q15831 433 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 GPR139Q6DWJ6 353 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 PGBD2Q6P3X8 592 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 SMARCD3Q6STE5 483 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 ZER1Q7Z7L7 766 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 OR52L1Q8NGH7 329 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 OR6X1Q8NH79 312 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 DNAJA3Q96EY1 480 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 GPX7Q96SL4 187 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 LINC00470Q9BZP3 86 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 S100A14Q9HCY8 104 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 PDP1Q9P0J1 537 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 B3GAT1Q9P2W7 334 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 UPB1Q9UBR1 384 aa15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 ING1Q9UK53 422 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-210ENST00000540931 KDM4EB2RXH2 506 aaPredicted RBP15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 EEF1E1-BLOC1S5C9J1V9 151 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 MCIDASD6RGH6 385 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 G3V2T6 193 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 EEF1E1O43324 174 aaKnown RBP15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 KLF4O43474 513 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 MGRN1O60291 552 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 KRT33AO76009 404 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 CGAP01215 116 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 SLC6A6P31641 620 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 RPL4P36578 427 aaKnown RBP15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 GPR4P46093 362 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 RPS6KA3P51812 740 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 SIRPAP78324 504 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 FOXF2Q12947 444 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 FBXW9Q5XUX1 488 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 ZNF770Q6IQ21 691 aaPredicted RBP15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 CASP12Q6UXS9 341 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 DPY19L2P2Q6ZN68 376 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 Q6ZT83 130 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 RASSF6Q6ZTQ3 369 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 SLC35D2Q76EJ3 337 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 ZNF771Q7L3S4 317 aaPredicted RBP15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 BTLAQ7Z6A9 289 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 EPHX4Q8IUS5 362 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 LRRC17Q8N6Y2 441 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 AQP11Q8NBQ7 271 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 PYDC1Q8WXC3 89 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 RNASE6Q93091 150 aaKnown RBP15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 SLCO5A1Q9H2Y9 848 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 TXNIPQ9H3M7 391 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 KIF17Q9P2E2 1029 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 CLEC4AQ9UMR7 237 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 BAIAP2Q9UQB8 552 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 SIGLEC7Q9Y286 467 aa15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 TEP1Q99973 2627 aaKnown RBP15.54■□□□□ 0.08
CLSTN3-210ENST00000540931 DIDO1Q9BTC0 2240 aaKnown RBP15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 ZNF814B7Z6K7 855 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 LRRN3E7EW58 273 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 C11orf98E9PRG8 122 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 IMPA2O14732 288 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 TRAF3IP2O43734 574 aaPredicted RBP15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 PTP4A3O75365 173 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 IGHMP01871 453 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 CD14P08571 375 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 RNF224P0DH78 156 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 PPP3CBP16298 524 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 CLDN17P56750 224 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 SORDQ00796 357 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 TFAP2EQ6VUC0 442 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 OR51A7Q8NH64 312 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 SLC25A44Q96H78 314 aaPredicted RBP15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 TNFRSF13CQ96RJ3 184 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 RBM24Q9BX46 236 aaKnown RBP15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 C8orf4Q9NR00 106 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 ASB6Q9NWX5 421 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 GRHPRQ9UBQ7 328 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 MALT1Q9UDY8 824 aa15.53■□□□□ 0.08
CLSTN3-210ENST00000540931 H0YHG0 523 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 XKRYO14609 159 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 CDC42EP2O14613 210 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 GASTP01350 101 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 IGHG1P01857 330 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 ZNF23P17027 643 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 PTNP21246 168 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 AQP2P41181 271 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 ERFP50548 548 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 SH3BGRP55822 239 aaPredicted RBP15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 RPL27P61353 136 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 ITGADQ13349 1161 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 RFX4Q33E94 735 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 OR7E24Q6IFN5 339 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 NIPAL3Q6P499 406 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 VWA1Q6PCB0 445 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 UBE2J2Q8N2K1 259 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 GPR137CQ8N3F9 429 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 ZIC4Q8N9L1 334 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 ATG16L2Q8NAA4 619 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 FANK1Q8TC84 345 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 LRTOMTQ8WZ04 291 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 ZNF566Q969W8 418 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 FEVQ99581 238 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 UCK2Q9BZX2 261 aa15.52■□□□□ 0.08
CLSTN3-210ENST00000540931 C12orf49Q9H741 205 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms