RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 THSD4Q6ZMP0 1018 aa8.72□□□□□ -1.01
TTC39C-203ENST00000540918 IQCF2Q8IXL9 164 aa8.72□□□□□ -1.01
TTC39C-203ENST00000540918 RNF113BQ8IZP6 322 aaKnown RBP8.72□□□□□ -1.01
TTC39C-203ENST00000540918 ZSCAN1Q8NBB4 408 aa8.72□□□□□ -1.01
TTC39C-203ENST00000540918 FAM83FQ8NEG4 500 aaPredicted RBP8.72□□□□□ -1.01
TTC39C-203ENST00000540918 ROBO4Q8WZ75 1007 aa8.72□□□□□ -1.01
TTC39C-203ENST00000540918 CREB3L1Q96BA8 519 aa8.72□□□□□ -1.01
TTC39C-203ENST00000540918 SLC41A2Q96JW4 573 aa8.72□□□□□ -1.01
TTC39C-203ENST00000540918 ABCA4P78363 2273 aa8.72□□□□□ -1.01
TTC39C-203ENST00000540918 WDR81Q562E7 1941 aa8.72□□□□□ -1.01
TTC39C-203ENST00000540918 BLACEA4D250 179 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 SLC33A1O00400 549 aaPredicted RBP8.71□□□□□ -1.01
TTC39C-203ENST00000540918 CXCL13O43927 109 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 CRTAPO75718 401 aaPredicted RBP8.71□□□□□ -1.01
TTC39C-203ENST00000540918 RBBP9O75884 186 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 HTR3BO95264 441 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 IGHG1P01857 330 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 CELA2AP08217 269 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 PTH2RP49190 550 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 DAP3P51398 398 aaKnown RBP8.71□□□□□ -1.01
TTC39C-203ENST00000540918 AP3S2P59780 193 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 PSG6Q00889 435 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 FOXF1Q12946 379 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 DEFB109BQ30KR1 87 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 COX15Q7KZN9 410 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 DCXRQ7Z4W1 244 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 GPR148Q8TDV2 347 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 GAB3Q8WWW8 586 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 BCL2L10Q9HD36 194 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 LHX9Q9NQ69 397 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 CNOT2Q9NZN8 540 aaKnown RBP8.71□□□□□ -1.01
TTC39C-203ENST00000540918 NOP16Q9Y3C1 178 aaKnown RBP8.71□□□□□ -1.01
TTC39C-203ENST00000540918 NOTCH4Q99466 2003 aa8.71□□□□□ -1.01
TTC39C-203ENST00000540918 FXYD6-FXYD2A0A087WZ82 144 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ZAR1LA6NP61 321 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 FOXS1O43638 330 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 OR7A10O76100 309 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 EFEMP2O95967 443 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 TPOP07202 933 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 NR2C1P13056 603 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 HLA-DMAP28067 261 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ZFP36L2P47974 494 aaKnown RBP8.71□□□□□ -1.02
TTC39C-203ENST00000540918 FASLGP48023 281 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 PITPNBP48739 271 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 UBE2IP63279 158 aaKnown RBP8.71□□□□□ -1.02
TTC39C-203ENST00000540918 PRKCDQ05655 676 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 SIGLEC14Q08ET2 396 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 INPP5JQ15735 1006 aaPredicted RBP8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ZNF628Q5EBL2 1059 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 LIPNQ5VXI9 398 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 NXNL2Q5VZ03 156 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ARSKQ6UWY0 536 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 TMPRSS7Q7RTY8 843 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ANKRD13BQ86YJ7 626 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 CCDC71Q8IV32 467 aaPredicted RBP8.71□□□□□ -1.02
TTC39C-203ENST00000540918 LRRC56Q8IYG6 542 aaPredicted RBP8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ACBD4Q8NC06 268 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 OR5J2Q8NH18 312 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ANKRD9Q96BM1 317 aaPredicted RBP8.71□□□□□ -1.02
TTC39C-203ENST00000540918 CACNG6Q9BXT2 260 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 FXYD6Q9H0Q3 95 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 FLRT3Q9NZU0 649 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ASH2LQ9UBL3 628 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 RHBDD3Q9Y3P4 386 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ZNF236Q9UL36 1845 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 CHD5Q8TDI0 1954 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 A0A1B0GTH9 108 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 A0A1W2PQ09 198 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ZNHIT1O43257 154 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ATP1B1P05026 303 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 UCHL1P09936 223 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 SBK2P0C263 348 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 CDAP32320 146 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 P2RX1P51575 399 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 PPP5CP53041 499 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ARPC4P59998 168 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 FOXC1Q12948 553 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 MFSD13AQ14CX5 517 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 NTRK2Q16620 822 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 TBRG1Q3YBR2 411 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 OR7G1Q8NGA0 311 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 OR4Q3Q8NH05 313 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 FCAMRQ8WWV6 532 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 ASB12Q8WXK4 309 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 AKIRIN1Q9H9L7 192 aaPredicted RBP8.71□□□□□ -1.02
TTC39C-203ENST00000540918 NOX4Q9NPH5 578 aa8.71□□□□□ -1.02
TTC39C-203ENST00000540918 MCTS1Q9ULC4 181 aaKnown RBP8.71□□□□□ -1.02
TTC39C-203ENST00000540918 CACNA1DQ01668 2161 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 SNRPD2P62316 118 aaKnown RBP8.7□□□□□ -1.02
TTC39C-203ENST00000540918 ZNF45Q02386 682 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 FMODQ06828 376 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 WIPI1Q5MNZ9 446 aaPredicted RBP8.7□□□□□ -1.02
TTC39C-203ENST00000540918 C3P1Q6ZMU1 363 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 GRINAQ7Z429 371 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 SLITRK4Q8IW52 837 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 PARP16Q8N5Y8 322 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 POGLUT1Q8NBL1 392 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 PIGCQ92535 297 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 MIB2Q96AX9 1013 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 CGGBP1Q9UFW8 167 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms