RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 FGF20Q9NP95 211 aaPredicted RBP12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 CHST11Q9NPF2 352 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 ACOT13Q9NPJ3 140 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 B4GALT7Q9UBV7 327 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 SEC14L4Q9UDX3 406 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 TRAPPC4Q9Y296 219 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 B3GALT5Q9Y2C3 310 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 KIAA1549Q9HCM3 1950 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 NBASA2RRP1 2371 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 LRRK2Q5S007 2527 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 NAV2Q8IVL1 2488 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 TEX13CA0A0J9YWL9 993 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 SLC22A31A6NKX4 558 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 GJE1A6NN92 205 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 H3BSA7 217 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 RNF13O43567 381 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 CEACAM4O75871 244 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 FADS2O95864 444 aaKnown RBP12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 CD46P15529 392 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 SLC2A5P22732 501 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 ACVR2AP27037 513 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 DCKP27707 260 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 MAP2K4P45985 399 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 CCL11P51671 97 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 B3GALT5-AS1P59052 145 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 RAC1P63000 192 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 ARG2P78540 354 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 PUDPQ08623 228 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 RAB39AQ14964 217 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 TOMM20Q15388 145 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 ZNF239Q16600 458 aaKnown RBP12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 DEFB109BQ30KR1 87 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 TMEM176BQ3YBM2 270 aaPredicted RBP12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 ERI1Q8IV48 349 aaKnown RBP12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 NPEPL1Q8NDH3 523 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 SDR9C7Q8NEX9 313 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 FDCSPQ8NFU4 85 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 MIB2Q96AX9 1013 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 TMIGD2Q96BF3 282 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 RASD2Q96D21 266 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 LGALS12Q96DT0 336 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 SCMH1Q96GD3 660 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 Q96M85 177 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 C5orf34Q96MH7 638 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 TSPAN32Q96QS1 320 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 OR5B2Q96R09 309 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 DDOQ99489 341 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 DOK1Q99704 481 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 HCAR1Q9BXC0 346 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 HES7Q9BYE0 225 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 YIPF3Q9GZM5 350 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 TMEM185BQ9H7F4 350 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 ZNF703Q9H7S9 590 aaPredicted RBP12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 GRHPRQ9UBQ7 328 aa12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 WARS2Q9UGM6 360 aaKnown RBP12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 DIMT1Q9UNQ2 313 aaKnown RBP12.79□□□□□ -0.36
CYB561A3-216ENST00000540755 NPIPB13A6NJU9 1138 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 ZNF99A8MXY4 864 aaPredicted RBP12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 NPIPB4C9JG80 1138 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 C11orf98E9PRG8 122 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 MS4A18H0YCH9 400 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 KLRC4-KLRK1H3BQV0 150 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 TRMUO75648 421 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 PMS2P2O95744 297 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 RAB36O95755 333 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 AHCYP23526 432 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 GDF1P27539 372 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 SHC1P29353 583 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 KRR1Q13601 381 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 HYAL4Q2M3T9 481 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 MS4A18Q3C1V0 323 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 UBE2UQ5VVX9 321 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 TMPPEQ6ZT21 453 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 JAZF1Q86VZ6 243 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 CYB561A3Q8NBI2 242 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 FAM83FQ8NEG4 500 aaPredicted RBP12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 OR52I1Q8NGK6 324 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 OR14L1PQ8NHC6 308 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 RORBQ92753 470 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 KISS1RQ969F8 398 aaPredicted RBP12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 OTULINQ96BN8 352 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 SNX18Q96RF0 628 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 TTTY12Q9BZ98 90 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 TXNIPQ9H3M7 391 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 MED20Q9H944 212 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 ZNF346Q9UL40 294 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 EXOGQ9Y2C4 368 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 KCNMB2Q9Y691 235 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 COL12A1Q99715 3063 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 A0A1W2PNR3 127 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 A0A1W2PNV4 684 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 CCDC182A6NF36 153 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 LINC01387J3KSC0 135 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 HPNP05981 417 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 ADRA2AP08913 450 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 SFTPDP35247 375 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 SLC25A1P53007 311 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 RPL27P61353 136 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 SLC35A1P78382 337 aa12.78□□□□□ -0.36
CYB561A3-216ENST00000540755 SYT6Q5T7P8 510 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms