RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 GLIPR1L2Q4G1C9 344 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 PHYHD1Q5SRE7 291 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 CARD17Q5XLA6 110 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 FAM91A1Q658Y4 838 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 ULK3Q6PHR2 472 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 FUNDC1Q8IVP5 155 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 UEVLDQ8IX04 471 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 ZCCHC24Q8N2G6 241 aaKnown RBP12.22□□□□□ -0.45
SNHG1-213ENST00000540725 RNF217Q8TC41 542 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 NEU4Q8WWR8 484 aaPredicted RBP12.22□□□□□ -0.45
SNHG1-213ENST00000540725 SLC47A1Q96FL8 570 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 SOX7Q9BT81 388 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 NOX3Q9HBY0 568 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 DYNLRB1Q9NP97 96 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 TCF7L2Q9NQB0 619 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 SLAMF8Q9P0V8 285 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 TESQ9UGI8 421 aaKnown RBP12.22□□□□□ -0.45
SNHG1-213ENST00000540725 CORINQ9Y5Q5 1042 aa12.22□□□□□ -0.45
SNHG1-213ENST00000540725 A0A087WUJ7 227 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 TMEM129A0AVI4 362 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 LRP5LA4QPB2 252 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 MS4A18H0YCH9 400 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 HLA-DOBP13765 273 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 PPIBP23284 216 aaKnown RBP12.21□□□□□ -0.45
SNHG1-213ENST00000540725 RGS8P57771 180 aaPredicted RBP12.21□□□□□ -0.45
SNHG1-213ENST00000540725 SRSF2Q01130 221 aaKnown RBP12.21□□□□□ -0.45
SNHG1-213ENST00000540725 POU3F1Q03052 451 aaPredicted RBP12.21□□□□□ -0.45
SNHG1-213ENST00000540725 DAG1Q14118 895 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 MS4A18Q3C1V0 323 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 KRT80Q6KB66 452 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 BLOC1S3Q6QNY0 202 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 C20orf196Q8IYI0 205 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 CDK20Q8IZL9 346 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 IL17RDQ8NFM7 739 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 OR6S1Q8NH40 331 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 CKAP2Q8WWK9 683 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 SPDL1Q96EA4 605 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 SLC41A3Q96GZ6 507 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 EPYCQ99645 322 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 EMC6Q9BV81 110 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 TMBIM4Q9HC24 238 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 SELENONQ9NZV5 590 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 VAPAQ9P0L0 249 aa12.21□□□□□ -0.45
SNHG1-213ENST00000540725 WNK2Q9Y3S1 2297 aa12.21□□□□□ -0.46
SNHG1-213ENST00000540725 A0A0B4J2E0 115 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 A0A1B0GX12 115 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 SH3PXD2BA1X283 911 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 PRORSD1PA6NEY8 169 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 HLA-HP01893 362 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 BGLAPP02818 100 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 IGFBP1P08833 259 aaPredicted RBP12.2□□□□□ -0.46
SNHG1-213ENST00000540725 SCARB2Q14108 478 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 OR1Q1Q15612 314 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 ADRM1Q16186 407 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 CR1LQ2VPA4 569 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 PAGE3Q5JUK9 113 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 ZNF813Q6ZN06 617 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 ZNF786Q8N393 782 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 SCAIQ8N9R8 606 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 LRR1Q96L50 414 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 C7orf26Q96N11 449 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 ZNF607Q96SK3 696 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 C19orf24Q9BVV8 132 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 ASPNQ9BXN1 380 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 IKZF5Q9H5V7 419 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 TMEM38AQ9H6F2 299 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 TMEM27Q9HBJ8 222 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 B3GAT2Q9NPZ5 323 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 MED29Q9NX70 200 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 B3GNT2Q9NY97 397 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 CCDC167Q9P0B6 97 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 CMAHPQ9Y471 501 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 GMEB1Q9Y692 573 aa12.2□□□□□ -0.46
SNHG1-213ENST00000540725 TRBV5-3A0A0A0MS03 114 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 LILRA1O75019 489 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 TGDSO95455 350 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 TACSTD2P09758 323 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 CD79AP11912 226 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 NR4A1P22736 598 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 SLC6A2P23975 617 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 APEX1P27695 318 aaKnown RBP12.19□□□□□ -0.46
SNHG1-213ENST00000540725 AQP1P29972 269 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 IL2RGP31785 369 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 IDH3AP50213 366 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 CHN2P52757 468 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 PUDPQ08623 228 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 PMS2P3Q13401 168 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 GSG1Q2KHT4 349 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 NHLRC1Q6VVB1 395 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 BHLHE22Q8NFJ8 381 aaPredicted RBP12.19□□□□□ -0.46
SNHG1-213ENST00000540725 UBASH3BQ8TF42 649 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 MS4A3Q96HJ5 214 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 TXNDC15Q96J42 360 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 MOGAT1Q96PD6 335 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 SNX18Q96RF0 628 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 EBF4Q9BQW3 602 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 WFDC6Q9BQY6 131 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 SLCO1B3Q9NPD5 702 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 SLC52A3Q9NQ40 469 aa12.19□□□□□ -0.46
SNHG1-213ENST00000540725 MRPL39Q9NYK5 338 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms