RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 ZDHHC21Q8IVQ6 265 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 ANKFN1Q8N957 763 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 IPMKQ8NFU5 416 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 VN1R2Q8NFZ6 395 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 ACTRT1Q8TDG2 376 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 ZFP90Q8TF47 636 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 RLN3Q8WXF3 142 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 SMIM10Q96HG1 83 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 C16orf45Q96MC5 204 aaPredicted RBP1.8□□□□□ -2.12
MDM2-227ENST00000540709 DNTTIP1Q9H147 329 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 LRRN3Q9H3W5 708 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 HPF1Q9NWY4 346 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 HOXC10Q9NYD6 342 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 PIPOXQ9P0Z9 390 aa1.8□□□□□ -2.12
MDM2-227ENST00000540709 DDX49Q9Y6V7 483 aaKnown RBP1.8□□□□□ -2.12
MDM2-227ENST00000540709 RPAP1Q9BWH6 1393 aaPredicted RBP1.8□□□□□ -2.12
MDM2-227ENST00000540709 TRAV40A0A0B4J280 105 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 C7orf66A4D0T2 115 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 NOL3O60936 208 aaKnown RBP1.79□□□□□ -2.12
MDM2-227ENST00000540709 IFNB1P01574 187 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 IGKV1D-16P01601 117 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 BGLAPP02818 100 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 RPA2P15927 270 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 PGAM1P18669 254 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 CNR1P21554 472 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 LAP3P28838 519 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 GSSP48637 474 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 SPIBQ01892 262 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 PDIA2Q13087 525 aaKnown RBP1.79□□□□□ -2.12
MDM2-227ENST00000540709 C1orf61Q13536 156 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 OR5I1Q13606 314 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 DUSP7Q16829 419 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 CARD16Q5EG05 197 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 TTC23Q5W5X9 447 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 LCN12Q6JVE5 192 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 CES3Q6UWW8 571 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 ZNF547Q8IVP9 402 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 PGAM4Q8N0Y7 254 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 FAM86B1Q8N7N1 296 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 THRSPQ92748 146 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 SMARCD2Q92925 531 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 DNAJC19Q96DA6 116 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 AURKBQ96GD4 344 aaPredicted RBP1.79□□□□□ -2.12
MDM2-227ENST00000540709 RBM14Q96PK6 669 aaKnown RBP1.79□□□□□ -2.12
MDM2-227ENST00000540709 CAPS2Q9BXY5 557 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 LINC00597Q9H2U6 94 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 SLC35D1Q9NTN3 355 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 UFSP2Q9NUQ7 469 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 CALYQ9NYX4 217 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 ZNF629Q9UEG4 869 aaPredicted RBP1.79□□□□□ -2.12
MDM2-227ENST00000540709 MARCOQ9UEW3 520 aaPredicted RBP1.79□□□□□ -2.12
MDM2-227ENST00000540709 ZNF222Q9UK12 451 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 TIMM10BQ9Y5J6 103 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 WIF1Q9Y5W5 379 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 NFASCO94856 1347 aa1.79□□□□□ -2.12
MDM2-227ENST00000540709 IGSF9BQ9UPX0 1349 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 A0A1W2PP18 115 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 MGRN1O60291 552 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 DIRAS1O95057 198 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 VAMP5O95183 116 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 IGLV2-23P01705 113 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 UGT2B4P06133 528 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 RNASE2P10153 161 aaKnown RBP1.78□□□□□ -2.12
MDM2-227ENST00000540709 PSMC3P17980 439 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 SLC2A5P22732 501 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 RORAP35398 523 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 CASP4P49662 377 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 CRYBB1P53674 252 aaPredicted RBP1.78□□□□□ -2.12
MDM2-227ENST00000540709 CACNG7P62955 275 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 ACVR1Q04771 509 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 KLHL30Q0D2K2 578 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 KLRB1Q12918 225 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 PRPSAP1Q14558 356 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 GUCA2BQ16661 112 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 KLHL38Q2WGJ6 581 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 NADK2Q4G0N4 442 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 KRTAP13-2Q52LG2 175 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 DMRTC1Q5HYR2 192 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 PRR9Q5T870 116 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 ZNF880Q6PDB4 577 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 LYPD2Q6UXB3 125 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 BRD3OSQ6XYD6 125 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 NUDCD3Q8IVD9 361 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 UBALD2Q8IYN6 164 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 OR52H1Q8NGJ2 320 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 PYROXD1Q8WU10 500 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 GEMIN6Q8WXD5 167 aaKnown RBP1.78□□□□□ -2.12
MDM2-227ENST00000540709 FGF14Q92915 247 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 CCT7Q99832 543 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 NOX3Q9HBY0 568 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 TMOD2Q9NZR1 351 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 XCL2Q9UBD3 114 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 CD84Q9UIB8 345 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 MMP17Q9ULZ9 603 aa1.78□□□□□ -2.12
MDM2-227ENST00000540709 MRPS7Q9Y2R9 242 aaKnown RBP1.78□□□□□ -2.12
MDM2-227ENST00000540709 LRP4O75096 1905 aa1.78□□□□□ -2.13
MDM2-227ENST00000540709 PLA2R1Q13018 1463 aa1.77□□□□□ -2.13
MDM2-227ENST00000540709 IGHV3-66A0A0C4DH42 116 aa1.77□□□□□ -2.13
MDM2-227ENST00000540709 PLAC8L1A1L4L8 177 aa1.77□□□□□ -2.13
MDM2-227ENST00000540709 OR5B21A6NL26 309 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms