RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 GLSO94925 669 aaPredicted RBP11.21□□□□□ -0.62
NPC1-202ENST00000540608 RPP14O95059 124 aaKnown RBP11.21□□□□□ -0.62
NPC1-202ENST00000540608 CSTAP01040 98 aa11.21□□□□□ -0.62
NPC1-202ENST00000540608 EGFP01133 1207 aa11.21□□□□□ -0.62
NPC1-202ENST00000540608 PBX2P40425 430 aa11.21□□□□□ -0.62
NPC1-202ENST00000540608 LRRN1Q6UXK5 716 aa11.21□□□□□ -0.62
NPC1-202ENST00000540608 FAM220AQ7Z4H9 259 aa11.21□□□□□ -0.62
NPC1-202ENST00000540608 ELSPBP1Q96BH3 223 aa11.21□□□□□ -0.62
NPC1-202ENST00000540608 GABRG3Q99928 467 aa11.21□□□□□ -0.62
NPC1-202ENST00000540608 MTIF3Q9H2K0 278 aaKnown RBP11.21□□□□□ -0.62
NPC1-202ENST00000540608 MED9Q9NWA0 146 aa11.21□□□□□ -0.62
NPC1-202ENST00000540608 MRM2Q9UI43 246 aaKnown RBP11.21□□□□□ -0.62
NPC1-202ENST00000540608 MOKQ9UQ07 419 aa11.21□□□□□ -0.62
NPC1-202ENST00000540608 F5P12259 2224 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 A0A0J9YY10 115 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 TMEM72A0PK05 275 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 SERINC4A6NH21 518 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 HIST1H2ABP04908 130 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 OR8G3PP0DMU2 310 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 HOXB2P14652 356 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 TMEM31Q5JXX7 168 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 PXDC1Q5TGL8 231 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 LIPNQ5VXI9 398 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 OR5M10Q6IEU7 315 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 NPSR1Q6W5P4 371 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 HIST3H2AQ7L7L0 130 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 BPHLQ86WA6 291 aaPredicted RBP11.2□□□□□ -0.62
NPC1-202ENST00000540608 GLB1L2Q8IW92 636 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 EXD3Q8N9H8 876 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 DNAAF1Q8NEP3 725 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 HIST1H2ACQ93077 130 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 C3orf49Q96BT1 292 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 SPACA7Q96KW9 195 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 Q96M85 177 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 COQ3Q9NZJ6 369 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 LRIT1Q9P2V4 623 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 ING1Q9UK53 422 aaPredicted RBP11.2□□□□□ -0.62
NPC1-202ENST00000540608 DTX4Q9Y2E6 619 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 TICRRQ7Z2Z1 1910 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 IGKV1D-42A0A075B6H8 117 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 MFSD2BA6NFX1 497 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 HRKO00198 91 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 TNFRSF10CO14798 259 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 XRCC3O43542 346 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 ITPKBP27987 946 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 SCAND1P57086 179 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 RGS7BPQ6MZT1 257 aaPredicted RBP11.2□□□□□ -0.62
NPC1-202ENST00000540608 SLC36A1Q7Z2H8 476 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 FAM122BQ7Z309 247 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 JAZF1Q86VZ6 243 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 OR4C3Q8NH37 302 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 PNPLA2Q96AD5 504 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 WDR89Q96FK6 387 aaPredicted RBP11.2□□□□□ -0.62
NPC1-202ENST00000540608 PPA2Q9H2U2 334 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 Q9N2J8 555 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 DZANK1Q9NVP4 752 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 HRASLS2Q9NWW9 162 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 SDHAF2Q9NX18 166 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 KLHDC2Q9Y2U9 406 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 KCNMB2Q9Y691 235 aa11.2□□□□□ -0.62
NPC1-202ENST00000540608 C4orf47A7E2U8 309 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 HMSDA8MTL9 139 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 BLOC1S5-TXNDC5H3BN57 136 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 PYCARD-AS1I3L0S3 204 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 CDK2AP1O14519 115 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 SERPINI2O75830 405 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 RBBP9O75884 186 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 RGS11O94810 467 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 KLF8O95600 359 aaPredicted RBP11.19□□□□□ -0.62
NPC1-202ENST00000540608 HOXD4P09016 255 aaPredicted RBP11.19□□□□□ -0.62
NPC1-202ENST00000540608 TMIGD3P0DMS9 266 aaPredicted RBP11.19□□□□□ -0.62
NPC1-202ENST00000540608 VSIG10L2P0DP72 767 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 APEHP13798 732 aaKnown RBP11.19□□□□□ -0.62
NPC1-202ENST00000540608 ZP3P21754 424 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 FAUP35544 74 aaKnown RBP11.19□□□□□ -0.62
NPC1-202ENST00000540608 AQP2P41181 271 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 GRK6P43250 576 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 SOX2P48431 317 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 DLX5P56178 289 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 SEC61A1P61619 476 aaKnown RBP11.19□□□□□ -0.62
NPC1-202ENST00000540608 TFF2Q03403 129 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 HLXQ14774 488 aaPredicted RBP11.19□□□□□ -0.62
NPC1-202ENST00000540608 CSRP2Q16527 193 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 NHLRC1Q6VVB1 395 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 ZNF595Q8IYB9 648 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 OR9A4Q8NGU2 314 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 PATE1Q8WXA2 126 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 CCDC74AQ96AQ1 378 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 TSSK2Q96PF2 358 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 CCDC3Q9BQI4 270 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 PBX4Q9BYU1 374 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 FKRPQ9H9S5 495 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 ZNF346Q9UL40 294 aaKnown RBP11.19□□□□□ -0.62
NPC1-202ENST00000540608 EPOPA6NHQ4 379 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 H7C417 338 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 SUSD5O60279 629 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 ZNF432O94892 652 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 ABHD16AO95870 558 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 IGF2P01344 180 aa11.19□□□□□ -0.62
NPC1-202ENST00000540608 CD14P08571 375 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms