RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 DGCR6Q14129 220 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 FGD3Q5JSP0 725 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 ZNF730Q6ZMV8 503 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 NANOGNBQ7Z5D8 188 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 PXKQ7Z7A4 578 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 OR13C2Q8NGS9 318 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 HS3ST6Q96QI5 342 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 GPA33Q99795 319 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 MUC13Q9H3R2 512 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 MCCC2Q9HCC0 563 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 VNN3Q9NY84 501 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 UPB1Q9UBR1 384 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 FAM32AQ9Y421 112 aaKnown RBP13.86□□□□□ -0.19
RPAIN-206ENST00000539417 NOX1Q9Y5S8 564 aa13.86□□□□□ -0.19
RPAIN-206ENST00000539417 TRAV27A0A087WT01 109 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 KLF4O43474 513 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 RNF13O43567 381 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 OR6A2O95222 327 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 CNOT4O95628 575 aaKnown RBP13.85□□□□□ -0.19
RPAIN-206ENST00000539417 HIST1H2ABP04908 130 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 CDH2P19022 906 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-206ENST00000539417 CRYGSP22914 178 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 IL32P24001 234 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 RRM2P31350 389 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 IFNA8P32881 189 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 RUNX1T1Q06455 604 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 PPP1R8Q12972 351 aaKnown RBP13.85□□□□□ -0.19
RPAIN-206ENST00000539417 CAMK2DQ13557 499 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 TAB1Q15750 504 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 STK11Q15831 433 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 GABRA6Q16445 453 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 HIST3H2AQ7L7L0 130 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 IGFN1Q86VF2 1251 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 WFDC8Q8IUA0 241 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 ADGRG5Q8IZF4 528 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 STEAP2Q8NFT2 490 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 HIST1H2ACQ93077 130 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 FAM46AQ96IP4 442 aaKnown RBP13.85□□□□□ -0.19
RPAIN-206ENST00000539417 TNFRSF13CQ96RJ3 184 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 RASSF1Q9NS23 344 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 SLC7A8Q9UHI5 535 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 POMPQ9Y244 141 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 RCE1Q9Y256 329 aa13.85□□□□□ -0.19
RPAIN-206ENST00000539417 TEX15Q9BXT5 2789 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 HRGP04196 525 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 MAGEA2P43356 314 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 OMPP47874 163 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 BIDP55957 195 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 TRAP1Q12931 704 aaKnown RBP13.84□□□□□ -0.19
RPAIN-206ENST00000539417 MTX3Q5HYI7 312 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 SLC35D2Q76EJ3 337 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 PIWIL3Q7Z3Z3 882 aaKnown RBP13.84□□□□□ -0.19
RPAIN-206ENST00000539417 TMEM200AQ86VY9 491 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 WDR31Q8NA23 367 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 LRRC75AQ8NAA5 344 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 POMGNT2Q8NAT1 580 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 OR4K5Q8NGD3 323 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 OR51A7Q8NH64 312 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 MCUR1Q96AQ8 359 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 HDHD5Q9BXW7 423 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 LIME1Q9H400 295 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 ANKRD19PQ9H560 264 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 TAS2R16Q9NYV7 291 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 POLQO75417 2590 aa13.84□□□□□ -0.19
RPAIN-206ENST00000539417 CIB4A0PJX0 185 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 SH3PXD2BA1X283 911 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 EFCAB9A8MZ26 197 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 M0R3G1 203 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 SLC43A1O75387 559 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 GADD45GO95257 159 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 SAGP10523 405 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-206ENST00000539417 ITGA2P17301 1181 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 MPGP29372 298 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 LIMS1P48059 325 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 RPS4XP62701 263 aaKnown RBP13.83□□□□□ -0.2
RPAIN-206ENST00000539417 ROR2Q01974 943 aaKnown RBP13.83□□□□□ -0.2
RPAIN-206ENST00000539417 C20orf196Q8IYI0 205 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 RNF113BQ8IZP6 322 aaKnown RBP13.83□□□□□ -0.2
RPAIN-206ENST00000539417 CANT1Q8WVQ1 401 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 PIK3IP1Q96FE7 263 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 MUS81Q96NY9 551 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 LINC00470Q9BZP3 86 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 OR10A4Q9H209 315 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 NELFAQ9H3P2 528 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 SLC24A3Q9HC58 644 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 GPR35Q9HC97 309 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 NPAP1Q9NZP6 1156 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 HIF3AQ9Y2N7 669 aa13.83□□□□□ -0.2
RPAIN-206ENST00000539417 OR5H1A6NKK0 313 aa13.82□□□□□ -0.2
RPAIN-206ENST00000539417 CASKO14936 926 aa13.82□□□□□ -0.2
RPAIN-206ENST00000539417 CLOCKO15516 846 aa13.82□□□□□ -0.2
RPAIN-206ENST00000539417 SEC14L2O76054 403 aa13.82□□□□□ -0.2
RPAIN-206ENST00000539417 FXYD6P3P58550 94 aa13.82□□□□□ -0.2
RPAIN-206ENST00000539417 HIKESHIQ53FT3 197 aa13.82□□□□□ -0.2
RPAIN-206ENST00000539417 TMPRSS11FQ6ZWK6 438 aa13.82□□□□□ -0.2
RPAIN-206ENST00000539417 ZER1Q7Z7L7 766 aa13.82□□□□□ -0.2
RPAIN-206ENST00000539417 CDC20BQ86Y33 519 aa13.82□□□□□ -0.2
RPAIN-206ENST00000539417 ANKK1Q8NFD2 765 aa13.82□□□□□ -0.2
RPAIN-206ENST00000539417 OR4C15Q8NGM1 316 aa13.82□□□□□ -0.2
RPAIN-206ENST00000539417 OR52N5Q8NH56 324 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms