RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 TM9SF2Q99805 663 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 VCX3BQ9H321 246 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 NRIP3Q9NQ35 241 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 ENOPH1Q9UHY7 261 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 POLEQ07864 2286 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 A0A1W2PRG6 482 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 CD14P08571 375 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 STSP08842 583 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 GLI4P10075 376 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 IFNGR1P15260 489 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 AQP4P55087 323 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 NPRL3Q12980 569 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 PDK3Q15120 406 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 ACKR1Q16570 336 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 TMEM236Q5W0B7 351 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 DPY19L2P2Q6ZN68 376 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 SLC35D2Q76EJ3 337 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 WDFY1Q8IWB7 410 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 ZIC4Q8N9L1 334 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 TXNDC15Q96J42 360 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 ZNF570Q96NI8 536 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 TSPAN32Q96QS1 320 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 BCO1Q9HAY6 547 aa20.89■□□□□ 0.94
TMEM260-202ENST00000538838 BHLHE40O14503 412 aa20.89■□□□□ 0.93
TMEM260-202ENST00000538838 VHLP40337 213 aa20.89■□□□□ 0.93
TMEM260-202ENST00000538838 CLDN17P56750 224 aa20.89■□□□□ 0.93
TMEM260-202ENST00000538838 GTF2IRD2BQ6EKJ0 949 aa20.89■□□□□ 0.93
TMEM260-202ENST00000538838 FAM122BQ7Z309 247 aa20.89■□□□□ 0.93
TMEM260-202ENST00000538838 GTF2IRD2Q86UP8 949 aa20.89■□□□□ 0.93
TMEM260-202ENST00000538838 INTS12Q96CB8 462 aaKnown RBP20.89■□□□□ 0.93
TMEM260-202ENST00000538838 GMPPAQ96IJ6 420 aaPredicted RBP20.89■□□□□ 0.93
TMEM260-202ENST00000538838 EMC3Q9P0I2 261 aa20.89■□□□□ 0.93
TMEM260-202ENST00000538838 IER3IP1Q9Y5U9 82 aa20.89■□□□□ 0.93
TMEM260-202ENST00000538838 SS18L1O75177 396 aaPredicted RBP20.88■□□□□ 0.93
TMEM260-202ENST00000538838 IGHMP01871 453 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 AGTR1P30556 359 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 PER3P56645 1201 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 GINS1Q14691 196 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 PTGES3Q15185 160 aaKnown RBP20.88■□□□□ 0.93
TMEM260-202ENST00000538838 PGGHGQ32M88 737 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 OR2A2Q6IF42 318 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 SLC27A4Q6P1M0 643 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 NAXEQ8NCW5 288 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 OR2T33Q8NG76 320 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 RASD2Q96D21 266 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 Q96M85 177 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 RDH12Q96NR8 316 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 ERMAPQ96PL5 475 aaPredicted RBP20.88■□□□□ 0.93
TMEM260-202ENST00000538838 EMC6Q9BV81 110 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 TXNIPQ9H3M7 391 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 ZNF346Q9UL40 294 aaKnown RBP20.88■□□□□ 0.93
TMEM260-202ENST00000538838 MEMO1Q9Y316 297 aa20.88■□□□□ 0.93
TMEM260-202ENST00000538838 ZNF462Q96JM2 2506 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 TEX13CA0A0J9YWL9 993 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 ZNF724A8MTY0 619 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 GPR171O14626 319 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 YES1P07947 543 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 NTF4P34130 210 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 TIMP3P35625 211 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 BIDP55957 195 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 RPL27P61353 136 aaKnown RBP20.87■□□□□ 0.93
TMEM260-202ENST00000538838 SIRPAP78324 504 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 CDK5Q00535 292 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 PMPCAQ10713 525 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 FOXF2Q12947 444 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 GUSBP1Q15486 140 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 EIF2S3LQ2VIR3 472 aaKnown RBP20.87■□□□□ 0.93
TMEM260-202ENST00000538838 IZUMO2Q6UXV1 221 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 ATCAYQ86WG3 371 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 ASB10Q8WXI3 467 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 DMRTA2Q96SC8 542 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 RASSF4Q9H2L5 321 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 SLC25A19Q9HC21 320 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 GLRX2Q9NS18 164 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 GRHPRQ9UBQ7 328 aa20.87■□□□□ 0.93
TMEM260-202ENST00000538838 NPIPB13A6NJU9 1138 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 ZAR1LA6NP61 321 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 NPIPB4C9JG80 1138 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 E9PLN8 166 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 BCL10O95999 233 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 IL2RAP01589 272 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 GIPRP48546 466 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 DAP3P51398 398 aaKnown RBP20.86■□□□□ 0.93
TMEM260-202ENST00000538838 RPS6KA3P51812 740 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 SLC35F1Q5T1Q4 408 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 ACSM5Q6NUN0 579 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.86■□□□□ 0.93
TMEM260-202ENST00000538838 LNX2Q8N448 690 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 VKORC1Q9BQB6 163 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 GRIP2Q9C0E4 1043 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 GP6Q9HCN6 339 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 NOSIPQ9Y314 301 aaKnown RBP20.86■□□□□ 0.93
TMEM260-202ENST00000538838 ESPL1Q14674 2120 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 TMIGD3P0DMS9 266 aaPredicted RBP20.86■□□□□ 0.93
TMEM260-202ENST00000538838 SDHAP31040 664 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 CEACAM8P31997 349 aaPredicted RBP20.86■□□□□ 0.93
TMEM260-202ENST00000538838 SMSP52788 366 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 TMEM201Q5SNT2 666 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 ARMC4Q5T2S8 1044 aa20.86■□□□□ 0.93
TMEM260-202ENST00000538838 NUFIP2Q7Z417 695 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms