RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 ZNF23P17027 643 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 NPR2P20594 1047 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 SLC6A2P23975 617 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 IGFBP5P24593 272 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 GRPRP30550 384 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 CALCRP30988 508 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 IDH3GP51553 393 aaPredicted RBP7.5□□□□□ -1.21
DDB1-212ENST00000538470 AQP5P55064 265 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 RGS8P57771 180 aaPredicted RBP7.5□□□□□ -1.21
DDB1-212ENST00000538470 ARF1P84077 181 aaKnown RBP7.5□□□□□ -1.21
DDB1-212ENST00000538470 HOXC5Q00444 222 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 IL1RL1Q01638 556 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 PUDPQ08623 228 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 SCARB2Q14108 478 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 SQLEQ14534 574 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 CEACAM16Q2WEN9 425 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 ZNF627Q7L945 461 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 LSRQ86X29 649 aaPredicted RBP7.5□□□□□ -1.21
DDB1-212ENST00000538470 UEVLDQ8IX04 471 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 PHC2Q8IXK0 858 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 HIPK4Q8NE63 616 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 NEU4Q8WWR8 484 aaPredicted RBP7.5□□□□□ -1.21
DDB1-212ENST00000538470 MAGEB18Q96M61 343 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 VRK1Q99986 396 aaPredicted RBP7.5□□□□□ -1.21
DDB1-212ENST00000538470 TMEM43Q9BTV4 400 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 ASPNQ9BXN1 380 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 DENND2DQ9H6A0 471 aaPredicted RBP7.5□□□□□ -1.21
DDB1-212ENST00000538470 TMEM27Q9HBJ8 222 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 CRLF2Q9HC73 371 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 MED4Q9NPJ6 270 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 SEC14L4Q9UDX3 406 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 SLC13A4Q9UKG4 626 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 FBXL3Q9UKT7 428 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 ANGPT4Q9Y264 503 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 NOX1Q9Y5S8 564 aa7.5□□□□□ -1.21
DDB1-212ENST00000538470 IGHV4-61A0A0C4DH41 118 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 FMO6PO60774 539 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 ENTPD5O75356 428 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 MT-ATP6P00846 226 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 BGLAPP02818 100 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 GPX2P18283 190 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 SRD5A1P18405 259 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 GIFP27352 417 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 EVX1P49640 407 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 IDH3AP50213 366 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 HGFACQ04756 655 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 RBBP4Q09028 425 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 SF3A3Q12874 501 aaKnown RBP eCLIP7.49□□□□□ -1.211e-18■■■■□ 19.6
DDB1-212ENST00000538470 NPRL3Q12980 569 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 OR1Q1Q15612 314 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 CARTPTQ16568 116 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 ZNF613Q6PF04 617 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 VHLLQ6RSH7 139 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 UGT2A3Q6UWM9 527 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 MDP1Q86V88 176 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 MYPOPQ86VE0 399 aaPredicted RBP7.49□□□□□ -1.21
DDB1-212ENST00000538470 COMTD1Q86VU5 262 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 ARMC8Q8IUR7 673 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 FUNDC1Q8IVP5 155 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 C20orf196Q8IYI0 205 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 KDM8Q8N371 416 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 PIP4P2Q8N4L2 257 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 CPPED1Q9BRF8 314 aaPredicted RBP7.49□□□□□ -1.21
DDB1-212ENST00000538470 PRR14Q9BWN1 585 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 BPESC1Q9GZL8 116 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 RABEP2Q9H5N1 569 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 SEC61A2Q9H9S3 476 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 NOX3Q9HBY0 568 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 NPHS2Q9NP85 383 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 DYNLRB1Q9NP97 96 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 SLC52A3Q9NQ40 469 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 MRPL39Q9NYK5 338 aaKnown RBP7.49□□□□□ -1.21
DDB1-212ENST00000538470 CCDC167Q9P0B6 97 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 VAPAQ9P0L0 249 aa7.49□□□□□ -1.21
DDB1-212ENST00000538470 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.49□□□□□ -1.21
DDB1-212ENST00000538470 LOC100289279A0A1B0GTE1 492 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 ZNF503-AS2A6NEH8 195 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 M0R3G1 203 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 CHP2O43745 196 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 UBL3O95164 117 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 STAMBPO95630 424 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 CELA3BP08861 270 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 TACSTD2P09758 323 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 DAOP14920 347 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 THBS4P35443 961 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 CAPZA2P47755 286 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 CHN2P52757 468 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 PCBP3P57721 371 aaKnown RBP7.48□□□□□ -1.21
DDB1-212ENST00000538470 RPS23P62266 143 aaKnown RBP7.48□□□□□ -1.21
DDB1-212ENST00000538470 GUCY1A3Q02108 690 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 SNTB2Q13425 540 aaKnown RBP7.48□□□□□ -1.21
DDB1-212ENST00000538470 DAG1Q14118 895 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 GSG1Q2KHT4 349 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 GLIPR1L2Q4G1C9 344 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 IQCCQ4KMZ1 466 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 PAGE3Q5JUK9 113 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 REP15Q6BDI9 236 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 ZNF813Q6ZN06 617 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 SPATA21Q7Z572 469 aa7.48□□□□□ -1.21
DDB1-212ENST00000538470 PXKQ7Z7A4 578 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms