RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ONECUT2O95948 504 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 KRT8P05787 483 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 SUMO3P55854 103 aaPredicted RBP14.18□□□□□ -0.14
MKS1-204ENST00000537529 OR6V1Q8N148 313 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 YIPF7Q8N8F6 280 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 EDAQ92838 391 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 ZC3HAV1LQ96H79 300 aaKnown RBP14.18□□□□□ -0.14
MKS1-204ENST00000537529 SNX18Q96RF0 628 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 INTS14Q96SY0 518 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 SYT4Q9H2B2 425 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 WDR76Q9H967 626 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 PRMT8Q9NR22 394 aaPredicted RBP14.18□□□□□ -0.14
MKS1-204ENST00000537529 RBFOX1Q9NWB1 397 aaKnown RBP14.18□□□□□ -0.14
MKS1-204ENST00000537529 LAMP5Q9UJQ1 280 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 PAIP2BQ9ULR5 123 aaKnown RBP14.18□□□□□ -0.14
MKS1-204ENST00000537529 KLHDC2Q9Y2U9 406 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 TMEM14AQ9Y6G1 99 aa14.18□□□□□ -0.14
MKS1-204ENST00000537529 DNAH14Q0VDD8 3507 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 A0A1W2PPK0 400 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 MEIOCA2RUB1 952 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 TVP23AA6NH52 213 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 VSTM2BA6NLU5 285 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 PSMD9O00233 223 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 ADAM10O14672 748 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 PDCD5O14737 125 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 PHYHO14832 338 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 LYRM1O43325 122 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 OR6A2O95222 327 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 CFIP05156 583 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 OR8G3PP0DMU2 310 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 EPXP11678 715 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 PITPNBP48739 271 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 FBXW4P57775 412 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 RPL27P61353 136 aaKnown RBP14.17□□□□□ -0.14
MKS1-204ENST00000537529 PPP1R3BQ86XI6 285 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 PM20D2Q8IYS1 436 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 EID2Q8N6I1 236 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 OR5L2Q8NGL0 311 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 OR6N2Q8NGY6 317 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 ST8SIA1Q92185 356 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 KCNJ15Q99712 375 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 HDHD2Q9H0R4 259 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 ZCCHC4Q9H5U6 513 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 GAREM1Q9H706 876 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 RNF121Q9H920 327 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 PRDM6Q9NQX0 595 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 MRM2Q9UI43 246 aaKnown RBP14.17□□□□□ -0.14
MKS1-204ENST00000537529 TRIOBPQ9H2D6 2365 aa14.17□□□□□ -0.14
MKS1-204ENST00000537529 OR2T1O43869 369 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 DXOO77932 396 aaKnown RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 PAHP00439 452 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 TRAPPC2P0DI81 140 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 TRAPPC2BP0DI82 140 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 TDGF1P13385 188 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 KIR2DL3P43628 341 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 NANOS3P60323 173 aaKnown RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 C17orf67Q0P5P2 114 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 RSBN1Q5VWQ0 802 aaPredicted RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 ZNF385CQ66K41 422 aaPredicted RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 PLET1Q6UQ28 207 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 C16orf47Q6ZP98 133 aaPredicted RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 CPEB2Q7Z5Q1 589 aaKnown RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 OR6S1Q8NH40 331 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 OR8K3Q8NH51 312 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 THAP3Q8WTV1 239 aaPredicted RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 HGDQ93099 445 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 DNAJA3Q96EY1 480 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 FRMD6Q96NE9 622 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 SMAD5Q99717 465 aaKnown RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 NOX4Q9NPH5 578 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 C19orf25Q9UFG5 118 aaPredicted RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 ASXL3Q9C0F0 2248 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 FER1L5A0AVI2 2057 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 RPP14O95059 124 aaKnown RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 AKR7A3O95154 331 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 WISP1O95388 367 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 IGHMP01871 453 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 NAGAP17050 411 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 ATF1P18846 271 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 AHCYP23526 432 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 EGR3Q06889 387 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 ALKBH1Q13686 389 aaKnown RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 ACKR1Q16570 336 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 CEP78Q5JTW2 689 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 ZNF57Q68EA5 555 aaPredicted RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 PYHIN1Q6K0P9 492 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 UBE2J2Q8N2K1 259 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 ZNF519Q8TB69 540 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 RFT1Q96AA3 541 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 MESP1Q9BRJ9 268 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 WACQ9BTA9 647 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 CRB3Q9BUF7 120 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 TXNIPQ9H3M7 391 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 MRPL39Q9NYK5 338 aaKnown RBP14.16□□□□□ -0.14
MKS1-204ENST00000537529 ZNF221Q9UK13 617 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 IKZF2Q9UKS7 526 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 FKBP7Q9Y680 259 aa14.16□□□□□ -0.14
MKS1-204ENST00000537529 UNC13CQ8NB66 2214 aa14.15□□□□□ -0.14
MKS1-204ENST00000537529 PRSS37A4D1T9 235 aa14.15□□□□□ -0.14
MKS1-204ENST00000537529 HSPB2A8KAH6 182 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms