RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 SLC17A5Q9NRA2 495 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 MRPL39Q9NYK5 338 aaKnown RBP10.89□□□□□ -0.67
PRKDC-207ENST00000536483 SELENONQ9NZV5 590 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 UPB1Q9UBR1 384 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 BAG5Q9UL15 447 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 MGAT4BQ9UQ53 548 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 AMDHD2Q9Y303 409 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 IGHV4-30-2A0A087WSY4 118 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 CIB4A0PJX0 185 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 TRAPPC13A5PLN9 417 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 A8MV72 311 aaPredicted RBP10.88□□□□□ -0.67
PRKDC-207ENST00000536483 FAM220BPB1ANY3 271 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 M0R082 166 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 M0R3H8 397 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 ABCD4O14678 606 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 TRAF3IP2O43734 574 aaPredicted RBP10.88□□□□□ -0.67
PRKDC-207ENST00000536483 RAD51DO75771 328 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 IFNA14P01570 189 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 OPN1SWP03999 348 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 ZNF43P17038 809 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 GRPRP30550 384 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 KDELR2P33947 212 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 SELENOPP49908 381 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 RASSF2P50749 326 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 ZP4Q12836 540 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 C3orf36Q3SXR2 165 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 CHRFAM7AQ494W8 412 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 ENTPD8Q5MY95 495 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 AGAP6Q5VW22 663 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 TMEM108Q6UXF1 575 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 LSRQ86X29 649 aaPredicted RBP10.88□□□□□ -0.67
PRKDC-207ENST00000536483 RBM45Q8IUH3 476 aaKnown RBP10.88□□□□□ -0.67
PRKDC-207ENST00000536483 SLC15A3Q8IY34 581 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 TMEM123Q8N131 208 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 ZNF417Q8TAU3 575 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 ADAMTS16Q8TE57 1224 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 SLC25A36Q96CQ1 311 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 LRR1Q96L50 414 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 ZNF587Q96SQ5 575 aaPredicted RBP10.88□□□□□ -0.67
PRKDC-207ENST00000536483 HOPXQ9BPY8 73 aaPredicted RBP10.88□□□□□ -0.67
PRKDC-207ENST00000536483 MOV10Q9HCE1 1003 aaKnown RBP10.88□□□□□ -0.67
PRKDC-207ENST00000536483 FAIMQ9NVQ4 179 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 ARMCX1Q9P291 453 aa10.88□□□□□ -0.67
PRKDC-207ENST00000536483 ARPC4-TTLL3A0A0A6YYG9 625 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 THRBP10828 461 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 COX4I1P13073 169 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 SH3BGRP55822 239 aaPredicted RBP10.87□□□□□ -0.67
PRKDC-207ENST00000536483 BNIP1Q12981 228 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 KLHL17Q6TDP4 642 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 WDR88Q6ZMY6 472 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 ZNF627Q7L945 461 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 LINGO2Q7L985 606 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 PXKQ7Z7A4 578 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 LIPHQ8WWY8 451 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 TMEM158Q8WZ71 300 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 BCL2L2Q92843 193 aaPredicted RBP10.87□□□□□ -0.67
PRKDC-207ENST00000536483 RCN3Q96D15 328 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 MOGAT1Q96PD6 335 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 PRSS27Q9BQR3 290 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 CACNG6Q9BXT2 260 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 EFCAB1Q9HAE3 211 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 CMTM6Q9NX76 183 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 CRNNQ9UBG3 495 aaPredicted RBP10.87□□□□□ -0.67
PRKDC-207ENST00000536483 SEC14L4Q9UDX3 406 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 NOX1Q9Y5S8 564 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 PLCE1Q9P212 2302 aa10.87□□□□□ -0.67
PRKDC-207ENST00000536483 A0A096LNT2 108 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 ELOVL7A1L3X0 281 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 HTR3EA5X5Y0 456 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 E7EQL1 145 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 ZNF587BE7ETH6 402 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 H0YHG0 523 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 PLPP3O14495 311 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 AKAP8O43823 692 aaKnown RBP10.86□□□□□ -0.67
PRKDC-207ENST00000536483 UPK3AO75631 287 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 OR5F1O95221 314 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 HPRP00739 348 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 TSPAN19P0C672 248 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 CD40P25942 277 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 GTF2E2P29084 291 aaKnown RBP10.86□□□□□ -0.67
PRKDC-207ENST00000536483 PRDX6P30041 224 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 TTKP33981 857 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 RBM34P42696 430 aaKnown RBP10.86□□□□□ -0.67
PRKDC-207ENST00000536483 NUDT6P53370 316 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 PRPS1P60891 318 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 SELENOWP63302 87 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 PUDPQ08623 228 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 ZNF74Q16587 644 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 TMEM249Q2WGJ8 235 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 C6orf52Q5T4I8 152 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 NIPAL3Q6P499 406 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 ANKRD16Q6P6B7 361 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 SLC22A25Q6T423 547 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 TREML1Q86YW5 311 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 CCDC36Q8IYA8 594 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 MICU2Q8IYU8 434 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 KDM8Q8N371 416 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 OR2T12Q8NG77 320 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 OR10H5Q8NGA6 315 aa10.86□□□□□ -0.67
PRKDC-207ENST00000536483 OR1K1Q8NGR3 316 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms