RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 TRIM64A6NGJ6 449 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 TRIM64BA6NI03 449 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 OR6C65A6NJZ3 312 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 OVOL3O00110 214 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 ARHGEF9O43307 516 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 SEC14L2O76054 403 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 IFNA14P01570 189 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 ADORA3P0DMS8 318 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 PAX1P15863 534 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 YAP1P46937 504 aaKnown RBP12.46□□□□□ -0.41
UBE3B-206ENST00000536398 GSK3BP49841 420 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 TAS2R41P59536 307 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 RPS4XP62701 263 aaKnown RBP12.46□□□□□ -0.41
UBE3B-206ENST00000536398 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.41
UBE3B-206ENST00000536398 CAMK2DQ13557 499 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 CEACAM16Q2WEN9 425 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 HACD2Q6Y1H2 254 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 SLC46A3Q7Z3Q1 461 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 CPLX4Q7Z7G2 160 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 C20orf196Q8IYI0 205 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 GPR137CQ8N3F9 429 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 MPP4Q96JB8 637 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 Q96MF0 132 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 HOPXQ9BPY8 73 aaPredicted RBP12.46□□□□□ -0.41
UBE3B-206ENST00000536398 CXorf56Q9H5V9 222 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 NANSQ9NR45 359 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 C20orf141Q9NUB4 165 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 NOX1Q9Y5S8 564 aa12.46□□□□□ -0.41
UBE3B-206ENST00000536398 IGHV1-18A0A0C4DH31 117 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 RPL36A-HNRNPH2H7BZ11 118 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 J3KTA2 159 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 CXCR6O00574 342 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 OR5F1O95221 314 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 MT-ATP6P00846 226 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 ASAH2BP0C7U1 165 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 IFNGR1P15260 489 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 NCK1P16333 377 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 ATP5J2P56134 94 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 PSME3P61289 254 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 ANKRD16Q6P6B7 361 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 ARPINQ7Z6K5 226 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 PXKQ7Z7A4 578 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 RBM15BQ8NDT2 890 aaKnown RBP12.45□□□□□ -0.42
UBE3B-206ENST00000536398 PIK3C3Q8NEB9 887 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 TRAF4Q9BUZ4 470 aaPredicted RBP12.45□□□□□ -0.42
UBE3B-206ENST00000536398 SEC61A2Q9H9S3 476 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 FKRPQ9H9S5 495 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 RHCGQ9UBD6 479 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 A4GNTQ9UNA3 340 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 MOKQ9UQ07 419 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 AP3M1Q9Y2T2 418 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 ATP23Q9Y6H3 246 aa12.45□□□□□ -0.42
UBE3B-206ENST00000536398 ZNF726A6NNF4 738 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 ATP6V1G2-DDX39BF2Z307 99 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 GSTA4O15217 222 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 PIP5K1CO60331 668 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 NDUFS7O75251 213 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 OR6A2O95222 327 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 ZNF682O95780 498 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 WNT11O96014 354 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 CELA3BP08861 270 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 UMPSP11172 480 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 FUT1P19526 365 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 BIDP55957 195 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 UBE2NP61088 152 aaKnown RBP12.44□□□□□ -0.42
UBE3B-206ENST00000536398 ZP4Q12836 540 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 MELKQ14680 651 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 PRSS57Q6UWY2 283 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 SLC35D2Q76EJ3 337 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 MYPOPQ86VE0 399 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-206ENST00000536398 MEX3DQ86XN8 651 aaKnown RBP12.44□□□□□ -0.42
UBE3B-206ENST00000536398 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 TMEM239Q8WW34 195 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 GTPBP3Q969Y2 492 aaKnown RBP12.44□□□□□ -0.42
UBE3B-206ENST00000536398 CMTM5Q96DZ9 223 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 RADILQ96JH8 1075 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 SLC19A3Q9BZV2 496 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 NSRP1Q9H0G5 558 aaKnown RBP12.44□□□□□ -0.42
UBE3B-206ENST00000536398 ALG2Q9H553 416 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 GDF2Q9UK05 429 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-206ENST00000536398 POU2F3Q9UKI9 436 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 MGAT4BQ9UQ53 548 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 MTORP42345 2549 aa12.44□□□□□ -0.42
UBE3B-206ENST00000536398 ARPC4-TTLL3A0A0A6YYG9 625 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 BLOC1S5-TXNDC5H3BN57 136 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 H7C1Q1 480 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 FFAR1O14842 300 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 RNF13O43567 381 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 AKAP8O43823 692 aaKnown RBP12.43□□□□□ -0.42
UBE3B-206ENST00000536398 OR7A10O76100 309 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 SERPINA1P01009 418 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 MT-ND1P03886 318 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 HIST1H2ABP04908 130 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 TTKP33981 857 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 FABP6P51161 128 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 CBLL1Q75N03 491 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 HIST3H2AQ7L7L0 130 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 PIGWQ7Z7B1 504 aa12.43□□□□□ -0.42
UBE3B-206ENST00000536398 DTX2Q86UW9 622 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms