RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 CDNFQ49AH0 187 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 MESTQ5EB52 335 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 NKAPLQ5M9Q1 402 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 LY6G6FQ5SQ64 297 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 C10orf91Q5T1B1 145 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HBMQ6B0K9 141 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 NIPAL3Q6P499 406 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 COMTD1Q86VU5 262 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 ZNF761Q86XN6 746 aaPredicted RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 NRROSQ86YC3 692 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 BEST3Q8N1M1 668 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CPXM2Q8N436 756 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 SPICQ8N5J4 248 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 ZNF433Q8N7K0 673 aaPredicted RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 FRMD1Q8N878 549 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 PPTC7Q8NI37 304 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 ZNF671Q8TAW3 534 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CD300LFQ8TDQ1 290 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 OSTF1Q92882 214 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H2BHQ93079 126 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 MR1Q95460 341 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CCDC74AQ96AQ1 378 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 PPCDCQ96CD2 204 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 WDR92Q96MX6 357 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 PTCHD1Q96NR3 888 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 OR2M4Q96R27 311 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 ZNF382Q96SR6 550 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H2BNQ99877 126 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H2BMQ99879 126 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 SULT4A1Q9BR01 284 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 NDUFAF3Q9BU61 184 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 TMPRSS13Q9BYE2 586 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CDT1Q9H211 546 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 P2RY12Q9H244 342 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 SEC61A2Q9H9S3 476 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 RPF1Q9H9Y2 349 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 FBRSQ9HAH7 460 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 MSL2Q9HCI7 577 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 ZSCAN32Q9NX65 697 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 CACFD1Q9UGQ2 172 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 FOXD3Q9UJU5 478 aaPredicted RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 FBXW2Q9UKT8 454 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 PCDHB1Q9Y5F3 818 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 GOLGA4Q13439 2230 aaKnown RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 KIF26AQ9ULI4 1882 aaPredicted RBP3.41□□□□□ -1.86
MCF2-210ENST00000536274 TICRRQ7Z2Z1 1910 aa3.41□□□□□ -1.86
MCF2-210ENST00000536274 TGIF2-C20orf24A0A0A6YYL0 155 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 GNG14A0A1W2PPG7 69 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 CPSF4LA6NMK7 179 aaKnown RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 IDSB3KWA1 339 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 EEF1E1-BLOC1S5C9J1V9 151 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 MASP2O00187 686 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 MAFKO60675 156 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 NME6O75414 186 aaPredicted RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 FBXO24O75426 580 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 RGS9O75916 674 aaPredicted RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 PPP1R3DO95685 299 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 TGFB1P01137 390 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 IFNGP01579 166 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 HLA-DPB1P04440 258 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ITGA5P08648 1049 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 OR8U9P0C7N5 309 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 OR13C7P0DN81 318 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 PIPP12273 146 aaPredicted RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 OSMP13725 252 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 RAC2P15153 192 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 PGAM2P15259 253 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 DPP4P27487 766 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 LPAR6P43657 344 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 MTNR1AP48039 350 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 CSNK1EP49674 416 aaKnown RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 SULT1A1P50225 295 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 GATMP50440 423 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 DLX5P56178 289 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ARF5P84085 180 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 MC1RQ01726 317 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ID2Q02363 134 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 OR5I1Q13606 314 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 C14orf28Q4W4Y0 310 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 PRAMEF14Q5SWL7 426 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 SMARCD3Q6STE5 483 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ALKAL1Q6UXT8 129 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 CERS6Q6ZMG9 384 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ZNF705AQ6ZN79 300 aaPredicted RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 WFDC8Q8IUA0 241 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ZNF295-AS1Q8N0V1 137 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 MMP21Q8N119 569 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 HIST3H2BBQ8N257 126 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 RFLNBQ8N5W9 214 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 SIRT6Q8N6T7 355 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 TMEM99Q8N816 258 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 OR8U1Q8NH10 309 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 C22orf15Q8WYQ4 148 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ARL11Q969Q4 196 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 PACRGQ96M98 296 aaPredicted RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 RIOK2Q9BVS4 552 aaKnown RBP3.4□□□□□ -1.86
MCF2-210ENST00000536274 WDCPQ9H6R7 721 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 ZFYVE1Q9HBF4 777 aa3.4□□□□□ -1.86
MCF2-210ENST00000536274 TMEM27Q9HBJ8 222 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms