RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 MEGF10Q96KG7 1140 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 GAL3ST1Q99999 423 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 ADAM29Q9UKF5 820 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 CYP8B1Q9UNU6 501 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 PLEKHA6Q9Y2H5 1048 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 HEBP2Q9Y5Z4 205 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 TDRD6O60522 2096 aaKnown RBP12.81□□□□□ -0.36
LIG1-203ENST00000536218 PRR19A6NJB7 356 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 DNAJB6O75190 326 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 CLN5O75503 358 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 UBXN7O94888 489 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 NDUFB7P17568 137 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 ATF1P18846 271 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 RIDAP52758 137 aaKnown RBP12.81□□□□□ -0.36
LIG1-203ENST00000536218 ALG11Q2TAA5 492 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 DEFB134Q4QY38 66 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 MOB3CQ70IA8 216 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 TPRA1Q86W33 373 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 ARMC10Q8N2F6 343 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 OR13H1Q8NG92 308 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 RLN3Q8WXF3 142 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 ACOT11Q8WXI4 607 aaPredicted RBP12.81□□□□□ -0.36
LIG1-203ENST00000536218 KIR3DX1Q9H7L2 352 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 KCNE3Q9Y6H6 103 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 A0A1B0GTQ1 180 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 CCDC85CA6NKD9 419 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 STMND1H3BQB6 276 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 ZNF888P0CJ79 500 aaPredicted RBP12.81□□□□□ -0.36
LIG1-203ENST00000536218 HTR2AP28223 471 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 ID2Q02363 134 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 DEFB119Q8N690 84 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 SMRP1Q8NCR6 262 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 OR9A2Q8NGT5 310 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 AKR7LQ8NHP1 331 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 WDR13Q9H1Z4 485 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 CNIH4Q9P003 139 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 CAMK2AQ9UQM7 478 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 ZC3H12DA2A288 527 aaKnown RBP12.8□□□□□ -0.36
LIG1-203ENST00000536218 RHPN2P1A8MT19 583 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 PYCARD-AS1I3L0S3 204 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 UBE2CO00762 179 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 CELA2BP08218 269 aaPredicted RBP12.8□□□□□ -0.36
LIG1-203ENST00000536218 PTNP21246 168 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 DCTDP32321 178 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 ADH7P40394 386 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 BUD31P41223 144 aaPredicted RBP12.8□□□□□ -0.36
LIG1-203ENST00000536218 SKP2Q13309 424 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 GPR18Q14330 331 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 VN1R4Q7Z5H5 301 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 SPTBP11277 2137 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 SOCS6O14544 535 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 SEMA4FO95754 770 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 ANXA2P07355 339 aaKnown RBP12.8□□□□□ -0.36
LIG1-203ENST00000536218 MC3RP41968 323 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 SLC16A1P53985 500 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 PPIAP62937 165 aaKnown RBP12.8□□□□□ -0.36
LIG1-203ENST00000536218 CDK5Q00535 292 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 FBXO42Q6P3S6 717 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 RPTNQ6XPR3 784 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 SLC29A4Q7RTT9 530 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 PAQR8Q8TEZ7 354 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 RFKQ969G6 155 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 FAM131CQ96AQ9 280 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 ZNF607Q96SK3 696 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 SEBOXQ9HB31 216 aaPredicted RBP12.8□□□□□ -0.36
LIG1-203ENST00000536218 A4GALTQ9NPC4 353 aa12.8□□□□□ -0.36
LIG1-203ENST00000536218 AK6Q9Y3D8 172 aaKnown RBP12.8□□□□□ -0.36
LIG1-203ENST00000536218 A0A0G2JK05 382 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 CTSVO60911 334 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 SC5DO75845 299 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 F3P13726 295 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 MGMTP16455 207 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 ABCD3P28288 659 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 AKT2P31751 481 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 STXBP1P61764 594 aaKnown RBP12.79□□□□□ -0.36
LIG1-203ENST00000536218 MRPS21P82921 87 aaKnown RBP12.79□□□□□ -0.36
LIG1-203ENST00000536218 FCRLBQ6BAA4 426 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 TSSK4Q6SA08 328 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 LRRTM1Q86UE6 522 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 COMTD1Q86VU5 262 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 MFSD9Q8NBP5 474 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 OR10H4Q8NGA5 316 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 OR5W2Q8NH69 310 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 SUN3Q8TAQ9 357 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 LGALS14Q8TCE9 139 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 TCTEX1D2Q8WW35 142 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 SCARF2Q96GP6 870 aaPredicted RBP12.79□□□□□ -0.36
LIG1-203ENST00000536218 TMEM41AQ96HV5 264 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 TTTY10Q9BZA0 68 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 CACYBPQ9HB71 228 aaKnown RBP12.79□□□□□ -0.36
LIG1-203ENST00000536218 MRPS18AQ9NVS2 196 aaKnown RBP12.79□□□□□ -0.36
LIG1-203ENST00000536218 P2RX2Q9UBL9 471 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 TRIOBPQ9H2D6 2365 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 ARGFXA6NJG6 315 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 FADS1O60427 444 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 SLC2A10O95528 541 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 NTN1O95631 604 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 VSIG10L2P0DP72 767 aa12.79□□□□□ -0.36
LIG1-203ENST00000536218 ZNF44P15621 663 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms