RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 UBXN2BQ14CS0 331 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 FAM74A1Q5RGS3 127 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 C12orf45Q8N5I9 185 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-203ENST00000535977 TEX19Q8NA77 164 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 PXT1Q8NFP0 134 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 MMP17Q9ULZ9 603 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 OR2M5A3KFT3 312 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 SPP1P10451 314 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 RAD52P43351 418 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 PSMA6P60900 246 aaKnown RBP16.4■□□□□ 0.22
RAB40C-203ENST00000535977 RAP2BP61225 183 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 TSC22D1Q15714 1073 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 ZNF141Q15928 474 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 PAN3Q58A45 887 aaKnown RBP16.4■□□□□ 0.22
RAB40C-203ENST00000535977 SLC22A10Q63ZE4 541 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 SFXN4Q6P4A7 337 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 TAF8Q7Z7C8 310 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 CBLN2Q8IUK8 224 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 DOK4Q8TEW6 326 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 PATE1Q8WXA2 126 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 G6PC3Q9BUM1 346 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 OR51V1Q9H2C8 321 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 SERTAD3Q9UJW9 196 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 F5P12259 2224 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 ARHGEF17Q96PE2 2063 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-203ENST00000535977 SLC9B1P1A6NJY1 282 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 GPR31O00270 319 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 RNH1P13489 461 aaKnown RBP16.4■□□□□ 0.22
RAB40C-203ENST00000535977 GABRG2P18507 467 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 FUT1P19526 365 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 NOS3P29474 1203 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 ACAA2P42765 397 aaKnown RBP16.4■□□□□ 0.22
RAB40C-203ENST00000535977 MMP15P51511 669 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 METTL11BQ5VVY1 283 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 ULK3Q6PHR2 472 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 C5orf46Q6UWT4 87 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 SPICQ8N5J4 248 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 RBM18Q96H35 190 aaKnown RBP16.4■□□□□ 0.22
RAB40C-203ENST00000535977 C7orf50Q9BRJ6 194 aaKnown RBP16.4■□□□□ 0.22
RAB40C-203ENST00000535977 USP36Q9P275 1121 aaKnown RBP16.4■□□□□ 0.22
RAB40C-203ENST00000535977 UNC80Q8N2C7 3258 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 LRP4O75096 1905 aa16.4■□□□□ 0.22
RAB40C-203ENST00000535977 TRBV23-1A0A0A0MS06 115 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 RAB19A4D1S5 217 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 SRPX2O60687 465 aaPredicted RBP16.39■□□□□ 0.22
RAB40C-203ENST00000535977 SPDEFO95238 335 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 SERPINA3P01011 423 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 ZNF806P0C7X5 589 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 CTSEP14091 401 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 S1PR1P21453 382 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 BLKP51451 505 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 SLC16A1P53985 500 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 PSG6Q00889 435 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 COL9A2Q14055 689 aaPredicted RBP16.39■□□□□ 0.22
RAB40C-203ENST00000535977 FAM27D1Q5T7N8 215 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 LINC00114Q6XXX2 140 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 PRSS45Q7RTY3 260 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 LDLRAD3Q86YD5 345 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 ZFP82Q8N141 532 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 ZNF251Q9BRH9 671 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 CRB3Q9BUF7 120 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 HCAR1Q9BXC0 346 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 DNAJB12Q9NXW2 375 aaKnown RBP16.39■□□□□ 0.22
RAB40C-203ENST00000535977 TAS2R3Q9NYW6 316 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 FLRT3Q9NZU0 649 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 ZNF69Q9UC07 566 aa16.39■□□□□ 0.22
RAB40C-203ENST00000535977 PRAF2O60831 178 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 RDH16O75452 317 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 REM1O75628 298 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 HIST1H2ABP04908 130 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 PTNP21246 168 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 GPR143P51810 404 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 HHEXQ03014 270 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 MICBQ29980 383 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 ALG10BQ5I7T1 473 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 TMEM255AQ5JRV8 349 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 KIAA0895LQ68EN5 471 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 SLC25A25Q6KCM7 469 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 HIST3H2AQ7L7L0 130 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 ZNF595Q8IYB9 648 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 SLC44A3Q8N4M1 653 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 FAM71CQ8NEG0 241 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 OR51A7Q8NH64 312 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 GRHL3Q8TE85 626 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 SMPDL3BQ92485 455 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 HIST1H2ACQ93077 130 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 ADGRL4Q9HBW9 690 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 MED11Q9P086 117 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 EPHA6Q9UF33 1036 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 GPN3Q9UHW5 284 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-203ENST00000535977 SIRT4Q9Y6E7 314 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-203ENST00000535977 SPTBN5Q9NRC6 3674 aaKnown RBP16.39■□□□□ 0.21
RAB40C-203ENST00000535977 COL6A3P12111 3177 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 SPTY2D1-AS1A0A0U1RR47 76 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 EFCAB7A8K855 629 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 ARPC1BO15143 372 aaKnown RBP16.39■□□□□ 0.21
RAB40C-203ENST00000535977 CTNSO60931 367 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 UBL3O95164 117 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 PLAURQ03405 335 aa16.39■□□□□ 0.21
RAB40C-203ENST00000535977 ESPNLQ6ZVH7 1005 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms