RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CDH2P19022 906 aaPredicted RBP9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 BGNP21810 368 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 IL2RGP31785 369 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 CLDN17P56750 224 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 WDR4P57081 412 aaKnown RBP9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 RPS23P62266 143 aaKnown RBP9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 DAG1Q14118 895 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 ADRM1Q16186 407 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 MSMPQ1L6U9 139 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 CEACAM16Q2WEN9 425 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 KRT71Q3SY84 523 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 ZNF311Q5JNZ3 666 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 ELFN2Q5R3F8 820 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 PIWIL3Q7Z3Z3 882 aaKnown RBP9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 DPPA2Q7Z7J5 298 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 MDP1Q86V88 176 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 GPR137CQ8N3F9 429 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 CADM2Q8N3J6 435 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 PPP1R36Q96LQ0 422 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 PAIP1Q9H074 479 aaKnown RBP9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 TMEM38AQ9H6F2 299 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 WDR55Q9H6Y2 383 aaPredicted RBP9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 SLC52A3Q9NQ40 469 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 RAB21Q9UL25 225 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 NOX1Q9Y5S8 564 aa9.65□□□□□ -0.86
CLSTN3-206ENST00000535668 IGLV3-9A0A075B6K5 115 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 TRBV5-3A0A0A0MS03 114 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 A0A0B4J2E0 115 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 A0A1B0GWA3 101 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 A0A1B0GX12 115 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 WDR91A4D1P6 747 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 LRP5LA4QPB2 252 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 M0R082 166 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 M0R233 179 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 ENTPD5O75356 428 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 RP2O75695 350 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 SNAP29O95721 258 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 MT-ATP6P00846 226 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 GPX2P18283 190 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 NCF2P19878 526 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 APEX1P27695 318 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 HTR2AP28223 471 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 GRPRP30550 384 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 CRATP43155 626 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 RPS5P46782 204 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 GSG1Q2KHT4 349 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 SPATA21Q7Z572 469 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 CDK20Q8IZL9 346 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 SVOPLQ8N434 492 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF417Q8TAU3 575 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 PNPT1Q8TCS8 783 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 RDH5Q92781 318 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 SLC47A1Q96FL8 570 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF587Q96SQ5 575 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 SEPHS2Q99611 448 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 EPYCQ99645 322 aa9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 MRPL37Q9BZE1 423 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 TESQ9UGI8 421 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-206ENST00000535668 TMEM89A2RUT3 159 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 CENPBD1B2RD01 187 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 CLIC1O00299 241 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 TGDSO95455 350 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 HPRP00739 348 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 BGLAPP02818 100 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 SERPINA5P05154 406 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 ADRA2AP08913 450 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 ARAFP10398 606 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 IFNGR1P15260 489 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF250P15622 560 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 PPIBP23284 216 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 POLR2JP52435 117 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF133P52736 654 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 LMO4P61968 165 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 PUDPQ08623 228 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 ZP4Q12836 540 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 SNTB2Q13425 540 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 HIST3H3Q16695 136 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 ALG10BQ5I7T1 473 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 FAM209AQ5JX71 171 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 PHYHD1Q5SRE7 291 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 REEP3Q6NUK4 255 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 MAVSQ7Z434 540 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 ZCCHC24Q8N2G6 241 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 KDM8Q8N371 416 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 FAM216AQ8WUB2 273 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 STON2Q8WXE9 905 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 TMEM186Q96B77 213 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF426Q9BUY5 554 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 SPATA5L1Q9BVQ7 753 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 TCF7L2Q9NQB0 619 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 SLC25A37Q9NYZ2 338 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 REV1Q9UBZ9 1251 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 SEC14L4Q9UDX3 406 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 METRNQ9UJH8 293 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF346Q9UL40 294 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 DYSFO75923 2080 aa9.63□□□□□ -0.87
CLSTN3-206ENST00000535668 TRRAPQ9Y4A5 3859 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 TRAV20A0A0B4J274 112 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 SLC22A23A1A5C7 686 aa9.62□□□□□ -0.87
CLSTN3-206ENST00000535668 PRORSD1PA6NEY8 169 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms