RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 PLK3Q9H4B4 646 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 NARFLQ9H6Q4 476 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 MBNL1Q9NR56 388 aaKnown RBP11.69□□□□□ -0.54
SPG11-203ENST00000535302 PTTG3PQ9NZH4 202 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 RGPD5Q99666 1765 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 TMEM72A0PK05 275 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 TMEM202A6NGA9 273 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 CYB5BO43169 146 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 TOX4O94842 621 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 CD46P15529 392 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 NUDT1P36639 197 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 SNCAP37840 140 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 TNFRSF17Q02223 184 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 SLC46A3Q7Z3Q1 461 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 METTL17Q9H7H0 456 aaPredicted RBP11.69□□□□□ -0.54
SPG11-203ENST00000535302 FAM53CQ9NYF3 392 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 GLTPQ9NZD2 209 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 HLA-DOBP13765 273 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 RBPJQ06330 500 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 PRDX1Q06830 199 aaKnown RBP11.69□□□□□ -0.54
SPG11-203ENST00000535302 ADIRFQ15847 76 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 ZNF74Q16587 644 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 TCTN2Q96GX1 697 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 WDR83Q9BRX9 315 aaKnown RBP11.69□□□□□ -0.54
SPG11-203ENST00000535302 STEAP1Q9UHE8 339 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 GABARAPH6UMI1 98 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 TNFRSF10AO00220 468 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 MAGEB4O15481 346 aaPredicted RBP11.69□□□□□ -0.54
SPG11-203ENST00000535302 GABARAPO95166 117 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 MAKP20794 623 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 BCKDHBP21953 392 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 PRPH2P23942 346 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 RAD52P43351 418 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 PCBP3P57721 371 aaKnown RBP11.69□□□□□ -0.54
SPG11-203ENST00000535302 RPS25P62851 125 aaKnown RBP11.69□□□□□ -0.54
SPG11-203ENST00000535302 VEZF1Q14119 521 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 MPPED2Q15777 294 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 PRSS45Q7RTY3 260 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 ADIPOR2Q86V24 386 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 C11orf42Q8N5U0 333 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 DEFB108BQ8NET1 73 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 ANKRD9Q96BM1 317 aaPredicted RBP11.69□□□□□ -0.54
SPG11-203ENST00000535302 NMNAT3Q96T66 252 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 GPR160Q9UJ42 338 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 CHD4Q14839 1912 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 C17orf113A0A1B0GUU1 675 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 KLKB1P03952 638 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 TK1P04183 234 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 GPR85P60893 370 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 RPL7L1Q6DKI1 246 aaKnown RBP11.69□□□□□ -0.54
SPG11-203ENST00000535302 MED25Q71SY5 747 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 FAM122AQ96E09 287 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 PDXPQ96GD0 296 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 SORCS2Q96PQ0 1159 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 NMES1Q9C002 83 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 SLC39A9Q9NUM3 307 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 BABAM2Q9NXR7 383 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 SLC6A14Q9UN76 642 aa11.69□□□□□ -0.54
SPG11-203ENST00000535302 POLR2IP36954 125 aaKnown RBP11.68□□□□□ -0.54
SPG11-203ENST00000535302 BIDP55957 195 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 ZNF691Q5VV52 312 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 SLC6A19Q695T7 634 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 ACOT11Q8WXI4 607 aaPredicted RBP11.68□□□□□ -0.54
SPG11-203ENST00000535302 ARL2-SNX15V9GYD0 113 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 FAM166BA8MTA8 275 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 GABRPO00591 440 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 CCSO14618 274 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 OR8U8P0C7N1 319 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 CYCSP99999 105 aaKnown RBP11.68□□□□□ -0.54
SPG11-203ENST00000535302 CBLL1Q75N03 491 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 CMIPQ8IY22 773 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 MTHFD2P13995 350 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 BLVRBP30043 206 aaPredicted RBP11.68□□□□□ -0.54
SPG11-203ENST00000535302 SLC5A2P31639 672 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 HCCSP53701 268 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 RAB38P57729 211 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 FAM199XQ6PEV8 388 aaPredicted RBP11.68□□□□□ -0.54
SPG11-203ENST00000535302 NPSR1Q6W5P4 371 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 OR8U1Q8NH10 309 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 CHTF18Q8WVB6 975 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 ZNRF4Q8WWF5 429 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 AMBRA1Q9C0C7 1298 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 SLC25A31Q9H0C2 315 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 TMEM265A0A087WTH1 108 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 ZNF264O43296 627 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 CD1CP29017 333 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 DAPP51397 102 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 SLC38A5Q8WUX1 472 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 DEFB127Q9H1M4 99 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 SLC6A20Q9NP91 592 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 TMEM189-UBE2V1I3L0A0 370 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 FZD7O75084 574 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 UTS2O95399 124 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 SIX6O95475 246 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 CSF1P09603 554 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 ATP1B3P54709 279 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 FLI1Q01543 452 aaPredicted RBP11.68□□□□□ -0.54
SPG11-203ENST00000535302 UBE2NLQ5JXB2 153 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 PHOSPHO2Q8TCD6 241 aa11.68□□□□□ -0.54
SPG11-203ENST00000535302 CLEC5AQ9NY25 188 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms