RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 RHCGQ9UBD6 479 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 TESQ9UGI8 421 aaKnown RBP8.37□□□□□ -1.07
SSBP3-215ENST00000533946 ANGPT4Q9Y264 503 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 SH3GLB1Q9Y371 365 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 ATRQ13535 2644 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 MALRD1Q5VYJ5 2156 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 IGKV1D-43A0A0B4J1Z2 117 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 TMEM129A0AVI4 362 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF587BE7ETH6 402 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 NME4O00746 187 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 FFAR1O14842 300 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 AIM2O14862 343 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 SERPINB7O75635 380 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 KRT33AO76009 404 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 NQO1P15559 274 aaKnown RBP8.36□□□□□ -1.07
SSBP3-215ENST00000533946 NCK1P16333 377 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 AHCYP23526 432 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 MDH1P40925 334 aaKnown RBP8.36□□□□□ -1.07
SSBP3-215ENST00000533946 IDH3GP51553 393 aaPredicted RBP8.36□□□□□ -1.07
SSBP3-215ENST00000533946 MAP2K6P52564 334 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 BIDP55957 195 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 PRPS1P60891 318 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 MYBPC1Q00872 1141 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 NAAAQ02083 359 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 RBBP4Q09028 425 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 PMS2P3Q13401 168 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 FHL1Q13642 323 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 C1DQ13901 141 aaKnown RBP8.36□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF74Q16587 644 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 CYBRD1Q53TN4 286 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 METTL21CQ5VZV1 264 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 FAM91A1Q658Y4 838 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 OR7E24Q6IFN5 339 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 TMEM108Q6UXF1 575 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 DEF8Q6ZN54 512 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 CCDC80Q76M96 950 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 LRP11Q86VZ4 500 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 SLC15A3Q8IY34 581 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 C20orf196Q8IYI0 205 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 MUC15Q8N387 334 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 PAQR4Q8N4S7 273 aaPredicted RBP8.36□□□□□ -1.07
SSBP3-215ENST00000533946 POMGNT2Q8NAT1 580 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 C1orf162Q8NEQ5 155 aaPredicted RBP8.36□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF426Q9BUY5 554 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 LINC00470Q9BZP3 86 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 CXorf56Q9H5V9 222 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 C12orf10Q9HB07 376 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 NGBQ9NPG2 151 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 B3GNT2Q9NY97 397 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 MRPL39Q9NYK5 338 aaKnown RBP8.36□□□□□ -1.07
SSBP3-215ENST00000533946 POU2F3Q9UKI9 436 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 EDARQ9UNE0 448 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 TRIM33Q9UPN9 1127 aa8.36□□□□□ -1.07
SSBP3-215ENST00000533946 COL6A5A8TX70 2615 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 LOC102725191A0A1B0GVB3 256 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 LYNX1G3V0Z9 82 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 IMPA2O14732 288 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 CHP2O43745 196 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 IGLV1-44P01699 117 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 F13BP05160 661 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 ADORA3P0DMS8 318 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 LYNX1P0DP58 116 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 COX4I1P13073 169 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 CCL2P13500 99 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 B4GALT1P15291 398 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF26P17031 533 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-215ENST00000533946 PTAFRP25105 342 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 THBS4P35443 961 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 NPRL3Q12980 569 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 MFSD13AQ14CX5 517 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 LAPTM4AQ15012 233 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 ADIPOQQ15848 244 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 ZSWIM7Q19AV6 140 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 SWI5Q1ZZU3 235 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 LRRC23Q53EV4 343 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-215ENST00000533946 C8orf82Q6P1X6 216 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-215ENST00000533946 TBPL2Q6SJ96 375 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF584Q8IVC4 421 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 UEVLDQ8IX04 471 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 SKA3Q8IX90 412 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 MICU2Q8IYU8 434 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 FAM86B1Q8N7N1 296 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 FAM156AQ8NDB6 213 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 TSPEARQ8WU66 669 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 BOD1Q96IK1 185 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 SORCS2Q96PQ0 1159 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 SLC38A2Q96QD8 506 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 MDFIQ99750 246 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 ELAC2Q9BQ52 826 aaKnown RBP8.35□□□□□ -1.07
SSBP3-215ENST00000533946 SOX7Q9BT81 388 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 TMEM43Q9BTV4 400 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 SPATA5L1Q9BVQ7 753 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 CCDC134Q9H6E4 229 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 ARMC7Q9H6L4 198 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 CACYBPQ9HB71 228 aaKnown RBP8.35□□□□□ -1.07
SSBP3-215ENST00000533946 MAN2C1Q9NTJ4 1040 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 CBLN4Q9NTU7 201 aa8.35□□□□□ -1.07
SSBP3-215ENST00000533946 MYEF2Q9P2K5 600 aaKnown RBP8.35□□□□□ -1.07
SSBP3-215ENST00000533946 CRNNQ9UBG3 495 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-215ENST00000533946 RIMS3Q9UJD0 308 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms