RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 KLRF1Q9NZS2 232 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 RPS6KB2Q9UBS0 482 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZNF175Q9Y473 711 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 LRRC42Q9Y546 428 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 A0A1B0GWA3 101 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 SH3PXD2BA1X283 911 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 H0YJX3 145 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 FAAHO00519 579 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 NTN1O95631 604 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 IGHV4-31P0DP07 118 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 THRBP10828 461 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 PEPDP12955 493 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 ANXA8P13928 327 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 IGFBP5P24593 272 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 DPP4P27487 766 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 SLC6A8P48029 635 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 IDH2P48735 452 aaKnown RBP10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 GZMKP49863 264 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 DAPP51397 102 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 P2RX1P51575 399 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 CCR4P51679 360 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 COPZ1P61923 177 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 PGGHGQ32M88 737 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZNF672Q499Z4 452 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 PDLIM3Q53GG5 364 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 OR5M10Q6IEU7 315 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 PLCZ1Q86YW0 608 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 CADM2Q8N3J6 435 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 ATG16L2Q8NAA4 619 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 TOR1AIP2Q8NFQ8 470 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 OR5W2Q8NH69 310 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 B4GALNT2Q8NHY0 566 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 RNF217Q8TC41 542 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 SLC7A13Q8TCU3 470 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 SLC38A4Q969I6 547 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZNF524Q96C55 264 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 ADAD1Q96M93 576 aaKnown RBP10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 FEVQ99581 238 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZNF184Q99676 751 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 RBM4BQ9BQ04 359 aaKnown RBP10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 KLHDC3Q9BQ90 382 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 TRAF4Q9BUZ4 470 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 RBM4Q9BWF3 364 aaKnown RBP10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 GABARAPL1Q9H0R8 117 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 ANKRD19PQ9H560 264 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 PLSCR4Q9NRQ2 329 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 SLC7A7Q9UM01 511 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 ICAM5Q9UMF0 924 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 GPR52Q9Y2T5 361 aa10.01□□□□□ -0.81
TRAPPC4-213ENST00000533149 MED12Q93074 2177 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 A0A087WUU8 490 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 A0A0B4J2E0 115 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 A0A0G2JK05 382 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 A0A1B0GX12 115 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 DLGAP1O14490 977 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 GMFGO60234 142 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 HPRP00739 348 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 GASTP01350 101 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 ALPLP05186 524 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 FCGR2AP12318 317 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 UQCRBP14927 111 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 LSM11P83369 360 aaKnown RBP eCLIP10□□□□□ -0.81
TRAPPC4-213ENST00000533149 GUSBP1Q15486 140 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZIK1Q3SY52 487 aaPredicted RBP10□□□□□ -0.81
TRAPPC4-213ENST00000533149 NCMAPQ5T1S8 102 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 WBP2NLQ6ICG8 309 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 FAHD1Q6P587 224 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZNF730Q6ZMV8 503 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 BEND4Q6ZU67 534 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 RRM2BQ7LG56 351 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 UBQLNLQ8IYU4 475 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 LINC00471Q8N535 108 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 OR9Q2Q8NGE9 314 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 GPR119Q8TDV5 335 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 DNAJA4Q8WW22 397 aaPredicted RBP10□□□□□ -0.81
TRAPPC4-213ENST00000533149 PRSS27Q9BQR3 290 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 DSN1Q9H410 356 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 CHODLQ9H9P2 273 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 MED11Q9P086 117 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 PPP4R1LQ9P1A2 415 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 TMEFF2Q9UIK5 374 aaPredicted RBP10□□□□□ -0.81
TRAPPC4-213ENST00000533149 DKKL1Q9UK85 242 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 PRDM4Q9UKN5 801 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 EMC9Q9Y3B6 208 aa10□□□□□ -0.81
TRAPPC4-213ENST00000533149 IGLV3-32A0A0A0MS00 114 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 OR10H3O60404 316 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 MITFO75030 526 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 SNAP29O95721 258 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 NUDT14O95848 222 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 PGCP20142 388 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 USF1P22415 310 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 CBLP22681 906 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 HSPA13P48723 471 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 IL1RL1Q01638 556 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 TOMM34Q15785 309 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 ALG10BQ5I7T1 473 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 KDM4DQ6B0I6 523 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZNF770Q6IQ21 691 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 ALKBH2Q6NS38 261 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 ULK3Q6PHR2 472 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms