RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SERPINA1P01009 418 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 MT-ND1P03886 318 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 HIST1H2ABP04908 130 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 NCK1P16333 377 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 PRPS1P60891 318 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 KLHL24Q6TFL4 600 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 HIST3H2AQ7L7L0 130 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 SLC46A3Q7Z3Q1 461 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 GPR137CQ8N3F9 429 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 LRRC17Q8N6Y2 441 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 PIK3C3Q8NEB9 887 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 ANKK1Q8NFD2 765 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 PFN4Q8NHR9 129 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 TMEM239Q8WW34 195 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 IGFBPL1Q8WX77 278 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 GEMIN6Q8WXD5 167 aaKnown RBP13.46□□□□□ -0.25
CPSF1-210ENST00000532935 HIST1H2ACQ93077 130 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 FBXW5Q969U6 566 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 FAM162AQ96A26 154 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 TXNDC15Q96J42 360 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 PRRC1Q96M27 445 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 EMC6Q9BV81 110 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 C1QTNF6Q9BXI9 259 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 GPR35Q9HC97 309 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 ARL8BQ9NVJ2 186 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 MED29Q9NX70 200 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 ADA2Q9NZK5 511 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 TAGLN3Q9UI15 199 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 A4GNTQ9UNA3 340 aa13.46□□□□□ -0.25
CPSF1-210ENST00000532935 MAGED1Q9Y5V3 778 aaPredicted RBP13.46□□□□□ -0.25
CPSF1-210ENST00000532935 USF3Q68DE3 2245 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 SLC35F4A4IF30 521 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 SHISA9B4DS77 424 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 M0R1B8 84 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 SERPINI2O75830 405 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 UBOX5O94941 541 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 WNT11O96014 354 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 IGF2P01344 180 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 IFNW1P05000 195 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 ASAH2BP0C7U1 165 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 UMPSP11172 480 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 PTAFRP25105 342 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 CD40P25942 277 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 IFNA8P32881 189 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 SH3BGRP55822 239 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-210ENST00000532935 ADAM8P78325 824 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 ST3GAL3Q11203 375 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 ZP4Q12836 540 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 FOXD4Q12950 439 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-210ENST00000532935 TBRG1Q3YBR2 411 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 IFI44LQ53G44 452 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 CARD17Q5XLA6 110 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 TGIF2LYQ8IUE0 185 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 WDFY1Q8IWB7 410 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 C20orf196Q8IYI0 205 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 LRRC75A-AS1Q8N1F1 130 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-210ENST00000532935 TMEM171Q8WVE6 324 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 BCL2L2Q92843 193 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-210ENST00000532935 HSH2DQ96JZ2 352 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 HS6ST2Q96MM7 605 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 CRLF2Q9HC73 371 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 OBP2BQ9NPH6 170 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 TAS2R5Q9NYW4 299 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 EGFL7Q9UHF1 273 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 MGAT4BQ9UQ53 548 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 SNX13Q9Y5W8 968 aa13.45□□□□□ -0.26
CPSF1-210ENST00000532935 ACANP16112 2415 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 A0A096LPE4 126 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 A0A1W2PPZ6 126 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 ZNF726A6NNF4 738 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 M0R3G1 203 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 RNF13O43567 381 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 OR7A10O76100 309 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 YAP1P46937 504 aaKnown RBP13.44□□□□□ -0.26
CPSF1-210ENST00000532935 CDH11P55287 796 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 NKX6-1P78426 367 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-210ENST00000532935 ARF1P84077 181 aaKnown RBP13.44□□□□□ -0.26
CPSF1-210ENST00000532935 SPOCK1Q08629 439 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 CAMK2DQ13557 499 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 CEACAM16Q2WEN9 425 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 PHYHD1Q5SRE7 291 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 ANKRD16Q6P6B7 361 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 FKBP9P1Q75LS8 142 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 NANOGNBQ7Z5D8 188 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 RNF148Q8N7C7 305 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 MAGEE2Q8TD90 523 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-210ENST00000532935 ZNF837Q96EG3 531 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-210ENST00000532935 SGTBQ96EQ0 304 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 RADILQ96JH8 1075 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 LRR1Q96L50 414 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 NELFAQ9H3P2 528 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 C20orf141Q9NUB4 165 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 MED31Q9Y3C7 131 aa13.44□□□□□ -0.26
CPSF1-210ENST00000532935 ARPC4-TTLL3A0A0A6YYG9 625 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 BLOC1S5-TXNDC5H3BN57 136 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 J3KTA2 159 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 TMCC2O75069 709 aa13.43□□□□□ -0.26
CPSF1-210ENST00000532935 DNAJC8O75937 253 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-210ENST00000532935 HOXB1P14653 301 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms