RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ATP6V1C2Q8NEY4 427 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 OR52P1PQ8NH57 321 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF563Q8TA94 476 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 POC1BQ8TC44 478 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 RAB40AQ8WXH6 277 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 SGCDQ92629 289 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 MAL2Q969L2 176 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 TMEM19Q96HH6 336 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZFP3Q96NJ6 502 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 WDFY2Q96P53 400 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 NPAS1Q99742 590 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 PINK1Q9BXM7 581 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 ARMC7Q9H6L4 198 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 TMEM185BQ9H7F4 350 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 A4GALTQ9NPC4 353 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 EXOSC3Q9NQT5 275 aaKnown RBP5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 SAR1AQ9NR31 198 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 SERINC1Q9NRX5 453 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 PAQR5Q9NXK6 330 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 VAPAQ9P0L0 249 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 CLCF1Q9UBD9 225 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF629Q9UEG4 869 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 RCE1Q9Y256 329 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF175Q9Y473 711 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 GMEB1Q9Y692 573 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 USP9XQ93008 2570 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 SVILO95425 2214 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 DSPPQ9NZW4 1301 aa5.17□□□□□ -1.58
HMGB1P42-201ENST00000532126 EXPH5Q8NEV8 1989 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 DOPEY1Q5JWR5 2465 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 TRBV5-3A0A0A0MS03 114 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 LOC100653049A0A140TA62 436 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CDHR4A6H8M9 788 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 GMNCA6NCL1 334 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CFAP73A6NFT4 308 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 OOEPA6NGQ2 149 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 ANXA2P2A6NMY6 339 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 ENO4A6NNW6 628 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 BBIP1A8MTZ0 92 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 EEF1E1-BLOC1S5C9J1V9 151 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 ETV2O00321 342 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 TNFSF11O14788 317 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 ADAMDEC1O15204 470 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 SLC22A2O15244 555 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 EEF1E1O43324 174 aaKnown RBP5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CXCL13O43927 109 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CCDC22O60826 627 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 KRT34O76011 436 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 SYNGR4O95473 234 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 NTN1O95631 604 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 TGM6O95932 706 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 PLGP00747 810 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 FCGR2AP12318 317 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 RPS4Y1P22090 263 aaKnown RBP5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 SLC6A2P23975 617 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 SFTPDP35247 375 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 OPRM1P35372 400 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 GATA4P43694 442 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 IDH2P48735 452 aaKnown RBP5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 GZMKP49863 264 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF136P52737 540 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CARD18P57730 90 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CLRN1P58418 232 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 MTPNP58546 118 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CDK6Q00534 326 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 MERTKQ12866 999 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 FOXF2Q12947 444 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 SELENBP1Q13228 472 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CYLC2Q14093 348 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CAPRIN1Q14444 709 aaKnown RBP5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 PON3Q15166 354 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CYP51A1Q16850 503 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZSWIM7Q19AV6 140 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CTU2Q2VPK5 515 aaKnown RBP5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 TMEM176BQ3YBM2 270 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 SLC25A53Q5H9E4 307 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 COQ5Q5HYK3 327 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF311Q5JNZ3 666 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 PDSS1Q5T2R2 415 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 MRPL2Q5T653 305 aaKnown RBP5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 PRAMEF8Q5VWM4 474 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 PRAMEF7Q5VXH5 474 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 HBMQ6B0K9 141 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 REEP3Q6NUK4 255 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CLEC9AQ6UXN8 241 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 CD300LDQ6UXZ3 194 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 GLDNQ6ZMI3 551 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 GRINAQ7Z429 371 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 SPATA21Q7Z572 469 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 VRK2Q86Y07 508 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF440Q8IYI8 595 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 GCNT2Q8N0V5 402 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 FAM71CQ8NEG0 241 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 TSPAN14Q8NG11 270 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 OR10D3Q8NH80 312 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 OR2V1Q8NHB1 315 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 BBS10Q8TAM1 723 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 FNDC9Q8TBE3 224 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 C10orf82Q8WW14 230 aa5.16□□□□□ -1.58
HMGB1P42-201ENST00000532126 ST8SIA1Q92185 356 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms