RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 A8MVM7 634 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 ZNF208O43345 1280 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 HCRTR2O43614 444 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 FADS1O60427 444 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 FZD7O75084 574 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 ICOSLGO75144 302 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 AHSA1O95433 338 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 CER1O95813 267 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 LALBAP00709 142 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 IGHMP01871 453 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 BGLAPP02818 100 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 RAF1P04049 648 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 UCHL1P09936 223 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 APEX1P27695 318 aaKnown RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 ABCD3P28288 659 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 TACR3P29371 465 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 RBMS1P29558 406 aaKnown RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 PYCR1P32322 319 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 APOBEC1P41238 236 aaKnown RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 OR1D4P47884 311 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 SEPHS1P49903 392 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 GDI2P50395 445 aaKnown RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 PSMD7P51665 324 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 CCR4P51679 360 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 NR0B1P51843 470 aaKnown RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 RAP1BP61224 184 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 RAP1AP62834 184 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 SIRPAP78324 504 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 DCDP81605 110 aaKnown RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 CFHR1Q03591 330 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 ZNF85Q03923 595 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 ZNF117Q03924 483 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 MXD1Q05195 221 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 EGR3Q06889 387 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 C17orf67Q0P5P2 114 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 DNASE1L3Q13609 305 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 SHBQ15464 509 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 TAB1Q15750 504 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 CCDC85BQ15834 202 aaPredicted RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 ZNF79Q15937 498 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 NNATQ16517 81 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 NKAIN1Q4KMZ8 207 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 YIF1BQ5BJH7 314 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 NKAIN2Q5VXU1 208 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 TRIQKQ629K1 86 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 ZC3H14Q6PJT7 736 aaKnown RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 CCBE1Q6UXH8 406 aaPredicted RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 TMEM91Q6ZNR0 172 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 SHFQ7M4L6 423 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 HDDC2Q7Z4H3 204 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 AKAP14Q86UN6 197 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 RAB43Q86YS6 212 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 DND1Q8IYX4 353 aaKnown RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 CADM3Q8N126 398 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 DEFB119Q8N690 84 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 METTL27Q8N6F8 245 aaPredicted RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 SCAIQ8N9R8 606 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 LRRC75AQ8NAA5 344 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 OR4K13Q8NH42 304 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 MOSPD2Q8NHP6 518 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 STT3BQ8TCJ2 826 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 SAP25Q8TEE9 199 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 DOK4Q8TEW6 326 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 C15orf40Q8WUR7 153 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 SNX33Q8WV41 574 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 RNF138Q8WVD3 245 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 SNRNP27Q8WVK2 155 aaKnown RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 DEDD2Q8WXF8 326 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 THAP4Q8WY91 577 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 EDAQ92838 391 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 TSLPQ969D9 159 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 OMA1Q96E52 524 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 C4orf36Q96KX1 117 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 PGLYRP3Q96LB9 341 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 KLHL15Q96M94 604 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 DEPDC7Q96QD5 511 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 GAL3ST4Q96RP7 486 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 ADOQ96SZ5 270 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 CDX2Q99626 313 aaPredicted RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 LPAR4Q99677 370 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 ATF6BQ99941 703 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 ALG12Q9BV10 488 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 HCAR1Q9BXC0 346 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 HDHD5Q9BXW7 423 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 ENKD1Q9H0I2 346 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 MIXL1Q9H2W2 232 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 PPP1R3EQ9H7J1 279 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 MED20Q9H944 212 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 MOV10Q9HCE1 1003 aaKnown RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 SDHAF3Q9NRP4 125 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 CYSLTR2Q9NS75 346 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 RXFP3Q9NSD7 469 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 TAS2R10Q9NYW0 307 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 DHCR7Q9UBM7 475 aaKnown RBP5.04□□□□□ -1.6
PCF11-205ENST00000530906 GRHPRQ9UBQ7 328 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 ST6GALNAC2Q9UJ37 374 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 PILRBQ9UKJ0 227 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 FKBP7Q9Y680 259 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 MAU2Q9Y6X3 613 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 HEATR5AQ86XA9 2040 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms