RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 FOXO1Q12778 655 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 SOWAHCQ53LP3 525 aaPredicted RBP19.03■□□□□ 0.64
VPS28-212ENST00000530836 SLC35D3Q5M8T2 416 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 FOXB2Q5VYV0 432 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 SLC25A25Q6KCM7 469 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 ADCK1Q86TW2 530 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 NPEPL1Q8NDH3 523 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 BBS1Q8NFJ9 593 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 ZNF420Q8TAQ5 688 aaPredicted RBP19.03■□□□□ 0.64
VPS28-212ENST00000530836 Q96M85 177 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 OR5B2Q96R09 309 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 SNX18Q96RF0 628 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 TEAD3Q99594 435 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 JAM3Q9BX67 310 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 TXNIPQ9H3M7 391 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 EXOSC1Q9Y3B2 195 aaKnown RBP19.03■□□□□ 0.64
VPS28-212ENST00000530836 CSAG2Q9Y5P2 127 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 CEPT1Q9Y6K0 416 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 CNTRLQ7Z7A1 2325 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 KALRNO60229 2985 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 A0A1W2PRG6 482 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 CCDC160A6NGH7 325 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 KLRC4-KLRK1H3BQV0 150 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 NME2P1O60361 137 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 PMS2P2O95744 297 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 SP1P08047 785 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 NME2P22392 152 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 SLC2A5P22732 501 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 AHCYP23526 432 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 ATP6V1E1P36543 226 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 TNFSF10P50591 281 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 SLC25A1P53007 311 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 GPR85P60893 370 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 SLC35A1P78382 337 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 TOMM20Q15388 145 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 TMEM176BQ3YBM2 270 aaPredicted RBP19.03■□□□□ 0.64
VPS28-212ENST00000530836 KLHL12Q53G59 568 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 LCN1P1Q5VSP4 162 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 Q6ZS92 163 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 ZNF367Q7RTV3 350 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 ARIH2OSQ8N7S6 290 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 TEX19Q8NA77 164 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 SDR9C7Q8NEX9 313 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 PROKR2Q8NFJ6 384 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 OR5M1Q8NGP8 315 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 OR14L1PQ8NHC6 308 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 MIB2Q96AX9 1013 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 C5orf34Q96MH7 638 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 DDOQ99489 341 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 MND1Q9BWT6 205 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 MFRPQ9BY79 579 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 OR2B2Q9GZK3 357 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 EML6Q6ZMW3 1958 aa19.03■□□□□ 0.64
VPS28-212ENST00000530836 A0A1W2PNV4 684 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 XKRYO14609 159 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 INMTO95050 263 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 RPL27P61353 136 aaKnown RBP19.02■□□□□ 0.64
VPS28-212ENST00000530836 KLRB1Q12918 225 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 KRR1Q13601 381 aaKnown RBP19.02■□□□□ 0.64
VPS28-212ENST00000530836 ZNF239Q16600 458 aaKnown RBP19.02■□□□□ 0.64
VPS28-212ENST00000530836 FAM205BPQ63HN1 556 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 TMPPEQ6ZT21 453 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 PXKQ7Z7A4 578 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 SULF2Q8IWU5 870 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 CYB561A3Q8NBI2 242 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 TSPAN32Q96QS1 320 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 NMNAT3Q96T66 252 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 NMNAT2Q9BZQ4 307 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.02■□□□□ 0.64
VPS28-212ENST00000530836 OR51V1Q9H2C8 321 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 TNFRSF10DQ9UBN6 386 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 RALYQ9UKM9 306 aaKnown RBP19.02■□□□□ 0.64
VPS28-212ENST00000530836 ZNF346Q9UL40 294 aaKnown RBP19.02■□□□□ 0.64
VPS28-212ENST00000530836 B3GNT3Q9Y2A9 372 aa19.02■□□□□ 0.64
VPS28-212ENST00000530836 FAM208BQ5VWN6 2430 aa19.02■□□□□ 0.63
VPS28-212ENST00000530836 BSNQ9UPA5 3926 aa19.02■□□□□ 0.63
VPS28-212ENST00000530836 SPTA1P02549 2419 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 C11orf98E9PRG8 122 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 H3BSA7 217 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 TRMUO75648 421 aaKnown RBP19.01■□□□□ 0.63
VPS28-212ENST00000530836 RENP00797 406 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 TCEA1P23193 301 aaKnown RBP19.01■□□□□ 0.63
VPS28-212ENST00000530836 GDF1P27539 372 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 DAP3P51398 398 aaKnown RBP19.01■□□□□ 0.63
VPS28-212ENST00000530836 GP2P55259 537 aaKnown RBP19.01■□□□□ 0.63
VPS28-212ENST00000530836 RPS7P62081 194 aaKnown RBP19.01■□□□□ 0.63
VPS28-212ENST00000530836 CSNK2A1P68400 391 aaPredicted RBP19.01■□□□□ 0.63
VPS28-212ENST00000530836 C1DQ13901 141 aaKnown RBP19.01■□□□□ 0.63
VPS28-212ENST00000530836 PON3Q15166 354 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 LEG1Q6P5S2 330 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 RASD2Q96D21 266 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 DNAJA3Q96EY1 480 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 HCAR1Q9BXC0 346 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 MED20Q9H944 212 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 INPP5EQ9NRR6 644 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 SEC14L4Q9UDX3 406 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 RSL24D1Q9UHA3 163 aaKnown RBP19.01■□□□□ 0.63
VPS28-212ENST00000530836 MOKQ9UQ07 419 aa19.01■□□□□ 0.63
VPS28-212ENST00000530836 MS4A18H0YCH9 400 aa19■□□□□ 0.63
VPS28-212ENST00000530836 SULT2B1O00204 365 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms