RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 SMIM15Q7Z3B0 74 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 ANKRD37Q7Z713 158 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 LUZP2Q86TE4 346 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 ZNF329Q86UD4 541 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 TMEM17Q86X19 198 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 FAM72BQ86X60 149 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 FAM71AQ8IYT1 594 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 GTPBP8Q8N3Z3 284 aaPredicted RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 SAMD12Q8N8I0 201 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 TMEM35BQ8NCS4 154 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 NUP37Q8NFH4 326 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 OR2D3Q8NGH3 330 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 OR4D6Q8NGJ1 314 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 OR2V1Q8NHB1 315 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 LRRC15Q8TF66 581 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 MAFIPQ8WZ33 124 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 PIGCQ92535 297 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 YIPF5Q969M3 257 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 C18orf25Q96B23 403 aaPredicted RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 BIRC7Q96CA5 298 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 ZNF501Q96CX3 271 aaPredicted RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 ECHDC3Q96DC8 303 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 DGCR14Q96DF8 476 aaKnown RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 ASB9Q96DX5 294 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 SH3YL1Q96HL8 342 aaPredicted RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 GMPPAQ96IJ6 420 aaPredicted RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 RNF145Q96MT1 663 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 AGAP4Q96P64 663 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 TGM7Q96PF1 710 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 RCHY1Q96PM5 261 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 P2RY13Q9BPV8 354 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 KLHDC3Q9BQ90 382 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 SLC30A2Q9BRI3 323 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 C7orf50Q9BRJ6 194 aaKnown RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 CABLES2Q9BTV7 478 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 ROPN1BQ9BZX4 212 aaPredicted RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 TRIM9Q9C026 710 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 ZYG11BQ9C0D3 744 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 SLC38A1Q9H2H9 487 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 PIGUQ9H490 435 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 NXF3Q9H4D5 531 aaKnown RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 SPHK2Q9NRA0 654 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 TXLNGQ9NUQ3 528 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 STMN3Q9NZ72 180 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 STOX2Q9P2F5 926 aaPredicted RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 GNG12Q9UBI6 72 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 ABCD2Q9UBJ2 740 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 NUP50Q9UKX7 468 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 ICAM5Q9UMF0 924 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 EXOGQ9Y2C4 368 aaKnown RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 EXOSC1Q9Y3B2 195 aaKnown RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 TBL2Q9Y4P3 447 aaKnown RBP2.75□□□□□ -1.97
CD44-229ENST00000528672 SRCAPQ6ZRS2 3230 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 SCAPERQ9BY12 1400 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 ADGRL3Q9HAR2 1447 aa2.75□□□□□ -1.97
CD44-229ENST00000528672 IGHV3-20A0A0C4DH32 117 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 A0A1B0GW15 77 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 SLC5A10A0PJK1 596 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 TUBAL3A6NHL2 446 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 HHLA1C9JL84 531 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 MKRN2OSH3BPM6 223 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 SMLR1H3BR10 107 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 BTN3A3O00478 584 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ACOX3O15254 700 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 TCAPO15273 167 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 STX7O15400 261 aaKnown RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 PPIHO43447 177 aaKnown RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 CST8O60676 142 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 EIF1BO60739 113 aaKnown RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 DPM1O60762 260 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 MED6O75586 246 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 GATBO75879 557 aaKnown RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 B3GAT3O94766 335 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 NXPH4O95158 308 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 CLDN1O95832 211 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 IGF1P05019 195 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 MELTFP08582 738 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 HOXB7P09629 217 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ALPIP09923 528 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 OR9G9P0C7N8 305 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 NR2C1P13056 603 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ADRB3P13945 408 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 FOSL2P15408 326 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 GNB3P16520 340 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 CD36P16671 472 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 PSMC3P17980 439 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 PCMT1P22061 227 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ME2P23368 584 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 SHMT2P34897 504 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 MPIP34949 423 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 SERPINB5P36952 375 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 CEACAM3P40198 252 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 EIF1P41567 113 aaKnown RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 MAGEA2P43356 314 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 STK19P49842 368 aaPredicted RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 EMDP50402 254 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 TMEM33P57088 247 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 OR2B6P58173 313 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ATP6V0D1P61421 351 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms