RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 HOXD4P09016 255 aaPredicted RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RPL4P36578 427 aaKnown RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CAPGP40121 348 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RPL5P46777 297 aaKnown RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SLC16A1P53985 500 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RAD23AP54725 363 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CTXN1P60606 82 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ESRRGP62508 458 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ERVK-25P63136 954 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 POU3F1Q03052 451 aaPredicted RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 NPRL3Q12980 569 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SF3B4Q15427 424 aaKnown RBP eCLIP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TMEM236Q5W0B7 351 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RPL13AP3Q6NVV1 102 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 USP51Q70EK9 711 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 P4HA3Q7Z4N8 544 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 WDFY1Q8IWB7 410 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SLC43A2Q8N370 569 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 IQCF1Q8N6M8 205 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ZIC4Q8N9L1 334 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 OR9K2Q8NGE7 335 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 OR4Q3Q8NH05 313 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ZNF775Q96BV0 537 aaPredicted RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TXNDC15Q96J42 360 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 GPX7Q96SL4 187 aaPredicted RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 KATNB1Q9BVA0 655 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SF3B5Q9BWJ5 86 aaKnown RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TBC1D23Q9NUY8 699 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SH3BGRL2Q9UJC5 107 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CLEC4AQ9UMR7 237 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 OSGIN2Q9Y236 505 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ADAM18Q9Y3Q7 739 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ORC6Q9Y5N6 252 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 NOX1Q9Y5S8 564 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 POLEQ07864 2286 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 IGKV3D-15A0A087WSY6 115 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SMIM31A0A1B0GVY4 71 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MBD3L4A6NDZ8 208 aaPredicted RBP10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MBD3L3A6NE82 208 aaPredicted RBP10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MBD3L5A6NJ08 208 aaPredicted RBP10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TOXO94900 526 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 PPP1R3DO95685 299 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CD14P08571 375 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SMIM18P0DKX4 95 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 FCGR2AP12318 317 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 IFNGR1P15260 489 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ZNF43P17038 809 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 GNLYP22749 145 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SLC6A6P31641 620 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 NTF4P34130 210 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 GIPRP48546 466 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TUBA4AP68366 448 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 APOFQ13790 326 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 GINS1Q14691 196 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 PTGES3Q15185 160 aaKnown RBP10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 POU4F3Q15319 338 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ACKR1Q16570 336 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 KRT80Q6KB66 452 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ACSM5Q6NUN0 579 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 B3GNT6Q6ZMB0 384 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 DPY19L2P2Q6ZN68 376 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CREB3L2Q70SY1 520 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 UEVLDQ8IX04 471 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ANKK1Q8NFD2 765 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MBD3L2Q8NHZ7 208 aaPredicted RBP10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TEX47Q8TBZ9 253 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ZNF385AQ96PM9 386 aaKnown RBP10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MYCBPQ99417 103 aaPredicted RBP10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 IFT27Q9BW83 186 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 NRIP3Q9NQ35 241 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MED29Q9NX70 200 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 KLHL9Q9P2J3 617 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MYRFQ9Y2G1 1151 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 PCDHGB5Q9Y5G0 923 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 IER3IP1Q9Y5U9 82 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 FLVCR1Q9Y5Y0 555 aa10.81□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TRGV8A0A0C4DH27 118 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 E9PQ18 207 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 BHLHE40O14503 412 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CLPTM1O96005 669 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TFAP2AP05549 437 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 GLI4P10075 376 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CDH2P19022 906 aaPredicted RBP10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CA7P43166 264 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CDK5Q00535 292 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SRSF1Q07955 248 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TOP3AQ13472 1001 aaPredicted RBP10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 C1DQ13901 141 aaKnown RBP10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RNPS1Q15287 305 aaKnown RBP10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 KCTD21Q4G0X4 260 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 EEF1A1P5Q5VTE0 462 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SLC35D2Q76EJ3 337 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 FAM122BQ7Z309 247 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TUSC5Q8IXB3 177 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 GALNT11Q8NCW6 608 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 OR52L1Q8NGH7 329 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 Q96M85 177 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TSPAN32Q96QS1 320 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TTYH2Q9BSA4 534 aa10.8□□□□□ -0.68
TRAF3IP2-211ENST00000528599 POLDIP3Q9BY77 421 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms