RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CHRM4P08173 479 aa16.47■□□□□ 0.23
LTBP3-210ENST00000528516 DMRTC1Q5HYR2 192 aa16.47■□□□□ 0.23
LTBP3-210ENST00000528516 PRAMEF17Q5VTA0 474 aa16.47■□□□□ 0.23
LTBP3-210ENST00000528516 ZNF600Q6ZNG1 722 aa16.47■□□□□ 0.23
LTBP3-210ENST00000528516 OR1M1Q8NGA1 313 aa16.47■□□□□ 0.23
LTBP3-210ENST00000528516 OR5M9Q8NGP3 310 aa16.47■□□□□ 0.23
LTBP3-210ENST00000528516 NPRL2Q8WTW4 380 aa16.47■□□□□ 0.23
LTBP3-210ENST00000528516 ZNF707Q96C28 371 aaPredicted RBP16.47■□□□□ 0.23
LTBP3-210ENST00000528516 CTSFQ9UBX1 484 aa16.47■□□□□ 0.23
LTBP3-210ENST00000528516 TBC1D29Q9UFV1 150 aa16.47■□□□□ 0.23
LTBP3-210ENST00000528516 GPR34Q9UPC5 381 aa16.47■□□□□ 0.23
LTBP3-210ENST00000528516 VDAC3Q9Y277 283 aa16.47■□□□□ 0.23
LTBP3-210ENST00000528516 TXNL1O43396 289 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 LBX1P52954 281 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 NSDHLQ15738 373 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 KIAA1211LQ6NV74 962 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 TMEM41AQ96HV5 264 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 MS4A4EQ96PG1 132 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 TRPV4Q9HBA0 871 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 LAMA2P24043 3122 aaKnown RBP16.46■□□□□ 0.23
LTBP3-210ENST00000528516 GPR89AB7ZAQ6 455 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 GPR89BP0CG08 455 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 CLUP10909 449 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 TBXA2RP21731 343 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 HTR1FP30939 366 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 LUMP51884 338 aaPredicted RBP16.46■□□□□ 0.23
LTBP3-210ENST00000528516 ART1P52961 327 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 TSPAN31Q12999 210 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 DYRK1AQ13627 763 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 TSC22D1Q15714 1073 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 TMIEQ8NEW7 156 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 NMNAT3Q96T66 252 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 PRMT8Q9NR22 394 aaPredicted RBP16.46■□□□□ 0.23
LTBP3-210ENST00000528516 SIDT1Q9NXL6 827 aaKnown RBP16.46■□□□□ 0.23
LTBP3-210ENST00000528516 KLRF1Q9NZS2 232 aa16.46■□□□□ 0.23
LTBP3-210ENST00000528516 C2orf72A6NCS6 295 aa16.46■□□□□ 0.22
LTBP3-210ENST00000528516 ZNF705EA8MWA4 302 aaPredicted RBP16.46■□□□□ 0.22
LTBP3-210ENST00000528516 SC5DO75845 299 aa16.46■□□□□ 0.22
LTBP3-210ENST00000528516 RPS15AP62244 130 aaKnown RBP16.46■□□□□ 0.22
LTBP3-210ENST00000528516 ZNF765Q7L2R6 523 aa16.46■□□□□ 0.22
LTBP3-210ENST00000528516 ZNF546Q86UE3 836 aa16.46■□□□□ 0.22
LTBP3-210ENST00000528516 OR4Q3Q8NH05 313 aa16.46■□□□□ 0.22
LTBP3-210ENST00000528516 SMIM4Q8WVI0 70 aa16.46■□□□□ 0.22
LTBP3-210ENST00000528516 PINK1Q9BXM7 581 aa16.46■□□□□ 0.22
LTBP3-210ENST00000528516 TINAGL1Q9GZM7 467 aaPredicted RBP16.46■□□□□ 0.22
LTBP3-210ENST00000528516 ZCCHC4Q9H5U6 513 aa16.46■□□□□ 0.22
LTBP3-210ENST00000528516 ESRP2Q9H6T0 727 aaKnown RBP16.46■□□□□ 0.22
LTBP3-210ENST00000528516 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.46■□□□□ 0.22
LTBP3-210ENST00000528516 LRIT2A6NDA9 550 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 KDM4EB2RXH2 506 aaPredicted RBP16.45■□□□□ 0.22
LTBP3-210ENST00000528516 PRICKLE3O43900 615 aaPredicted RBP16.45■□□□□ 0.22
LTBP3-210ENST00000528516 ZNF432O94892 652 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 DCTDP32321 178 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 HAAOP46952 286 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 ARRB1P49407 418 aaPredicted RBP16.45■□□□□ 0.22
LTBP3-210ENST00000528516 BLKP51451 505 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 NR0B1P51843 470 aaKnown RBP16.45■□□□□ 0.22
LTBP3-210ENST00000528516 DUSP5Q16690 384 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 DEFB133Q30KQ1 61 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 GLDNQ6ZMI3 551 aaPredicted RBP16.45■□□□□ 0.22
LTBP3-210ENST00000528516 FCRLAQ7L513 359 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 CMTM4Q8IZR5 234 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 BRIX1Q8TDN6 353 aaKnown RBP16.45■□□□□ 0.22
LTBP3-210ENST00000528516 SLC6A7Q99884 636 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 SERGEFQ9UGK8 458 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 FARS2O95363 451 aaKnown RBP16.45■□□□□ 0.22
LTBP3-210ENST00000528516 ATP1B1P05026 303 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 RNH1P13489 461 aaKnown RBP16.45■□□□□ 0.22
LTBP3-210ENST00000528516 EN2P19622 333 aaPredicted RBP16.45■□□□□ 0.22
LTBP3-210ENST00000528516 KLF9Q13886 244 aaPredicted RBP16.45■□□□□ 0.22
LTBP3-210ENST00000528516 SLC25A24Q6NUK1 477 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 C17orf47Q8NEP4 570 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 DERL3Q96Q80 235 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 SARGQ9BW04 601 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 UBQLN3Q9H347 655 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 RBM7Q9Y580 266 aaKnown RBP16.45■□□□□ 0.22
LTBP3-210ENST00000528516 PRSS38A1L453 326 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 RBBP9O75884 186 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 CFIP05156 583 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 IKZF1Q13422 519 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 ABHD17CQ6PCB6 329 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 Q6ZNB5 142 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 ZSCAN1Q8NBB4 408 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 SFT2D1Q8WV19 159 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 NKX2-4Q9H2Z4 354 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 PELI2Q9HAT8 420 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 A4GALTQ9NPC4 353 aa16.45■□□□□ 0.22
LTBP3-210ENST00000528516 OR2AT4A6NND4 320 aa16.44■□□□□ 0.22
LTBP3-210ENST00000528516 SPP1P10451 314 aa16.44■□□□□ 0.22
LTBP3-210ENST00000528516 PRSS53Q2L4Q9 553 aa16.44■□□□□ 0.22
LTBP3-210ENST00000528516 PABPC1L2AQ5JQF8 200 aa16.44■□□□□ 0.22
LTBP3-210ENST00000528516 LURAP1LQ8IV03 231 aa16.44■□□□□ 0.22
LTBP3-210ENST00000528516 TSSK2Q96PF2 358 aa16.44■□□□□ 0.22
LTBP3-210ENST00000528516 CNN2Q99439 309 aaKnown RBP16.44■□□□□ 0.22
LTBP3-210ENST00000528516 C6orf106Q9H6K1 298 aaPredicted RBP16.44■□□□□ 0.22
LTBP3-210ENST00000528516 IL20Q9NYY1 176 aa16.44■□□□□ 0.22
LTBP3-210ENST00000528516 ABRACLQ9P1F3 81 aa16.44■□□□□ 0.22
LTBP3-210ENST00000528516 ADAM18Q9Y3Q7 739 aa16.44■□□□□ 0.22
LTBP3-210ENST00000528516 NPIPB8E9PQR5 432 aa16.44■□□□□ 0.22
LTBP3-210ENST00000528516 ABCD4O14678 606 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms