RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 CXADRP78310 365 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 DCDP81605 110 aaKnown RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 TXNL4AP83876 142 aaKnown RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 HOXC5Q00444 222 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 LGALS3BPQ08380 585 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 FUT7Q11130 342 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 SERTAD2Q14140 314 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 GK3PQ14409 553 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 ZNHIT3Q15649 155 aaPredicted RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 NSDHLQ15738 373 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 NPTX1Q15818 432 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 MAPK14Q16539 360 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 EXOC3L2Q2M3D2 409 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 COL28A1Q2UY09 1125 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 ARHGAP11BQ3KRB8 267 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 ZNF311Q5JNZ3 666 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 DCST2Q5T1A1 773 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 HES3Q5TGS1 186 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 PRAMEF8Q5VWM4 474 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 PRAMEF7Q5VXH5 474 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 TYW3Q6IPR3 259 aaKnown RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 FAM199XQ6PEV8 388 aaPredicted RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 FAM198BQ6UWH4 519 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 DHRS13Q6UX07 377 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 ZNF836Q6ZNA1 936 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 DTX2Q86UW9 622 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 MARCH9Q86YJ5 346 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 PRR22Q8IZ63 422 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 CLIP4Q8N3C7 705 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 ZNF614Q8N883 585 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 ZNF615Q8N8J6 731 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 CDRT4Q8N9R6 151 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 PLPP5Q8NEB5 264 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 DEFB124Q8NES8 71 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 OR52P1PQ8NH57 321 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 OR52J3Q8NH60 311 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 OR5K1Q8NHB7 308 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 MAGEE2Q8TD90 523 aaPredicted RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 ZNF721Q8TF20 911 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 PTPMT1Q8WUK0 201 aaPredicted RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 APOBEC4Q8WW27 367 aaKnown RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 CYGBQ8WWM9 190 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 DPF1Q92782 380 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 MR1Q95460 341 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 TMIGD2Q96BF3 282 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 SENP5Q96HI0 755 aaPredicted RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 ZNF597Q96LX8 424 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 CNBD2Q96M20 576 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 VSTM2LQ96N03 204 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 TRNT1Q96Q11 434 aaKnown RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 ZNF300Q96RE9 604 aaPredicted RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 GAL3ST4Q96RP7 486 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 STACQ99469 402 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 PELOQ9BRX2 385 aaKnown RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 LMF2Q9BU23 707 aaKnown RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 DPCDQ9BVM2 203 aaPredicted RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 NUDT9Q9BW91 350 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 PINK1Q9BXM7 581 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 KRTAP17-1Q9BYP8 105 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 ULBP3Q9BZM4 244 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 VCXQ9H320 206 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 PIGUQ9H490 435 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 REEP1Q9H902 201 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 SAP30LQ9HAJ7 183 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 BCL2L10Q9HD36 194 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 PALMDQ9NP74 551 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 CTPS2Q9NRF8 586 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 DUSP22Q9NRW4 184 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 SERINC1Q9NRX5 453 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 DECR2Q9NUI1 292 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 CALML5Q9NZT1 146 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 FLRT3Q9NZU0 649 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 PDP1Q9P0J1 537 aaPredicted RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 PISDQ9UG56 409 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 C3orf18Q9UK00 162 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 LIPT1Q9Y234 373 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 OSGIN2Q9Y236 505 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 ZNF443Q9Y2A4 671 aaPredicted RBP3.79□□□□□ -1.8
CD44-226ENST00000527889 PADI2Q9Y2J8 665 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 WDR45Q9Y484 360 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 LOXL2Q9Y4K0 774 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 POMT1Q9Y6A1 747 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 CLCA3PQ9Y6N3 262 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 ENPP4Q9Y6X5 453 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 BOD1L1Q8NFC6 3051 aa3.79□□□□□ -1.8
CD44-226ENST00000527889 NF1P21359 2839 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 DSPPQ9NZW4 1301 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 IGLV3-12A0A075B6K2 115 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 TRAV34A0A0B4J273 112 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 TRBV4-1A0A0J9YWV2 114 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 SPAARA0A1B0GVQ0 90 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 SERTM2A0A1B0GWG4 89 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 A0A1W2PNU3 283 aaPredicted RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 A1L4Q6 167 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 C5orf51A6NDU8 294 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 NPIPB13A6NJU9 1138 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 CPSF4LA6NMK7 179 aaKnown RBP3.78□□□□□ -1.8
CD44-226ENST00000527889 NPIPB5A8MRT5 1133 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 A8MXE2 369 aa3.78□□□□□ -1.8
CD44-226ENST00000527889 NPIPB4C9JG80 1138 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms