RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 TMEM72A0PK05 275 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 FAM171A2A8MVW0 826 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 PRR32B1ATL7 298 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 AIPO00170 330 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 TOX3O15405 576 aaPredicted RBP13.92□□□□□ -0.18
USH1C-207ENST00000527720 PIN1P1O15428 100 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 UPK3AO75631 287 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 SLC25A12O75746 678 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 ZFPL1O95159 310 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 P2RX1P51575 399 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 RRAS2P62070 204 aaPredicted RBP13.92□□□□□ -0.18
USH1C-207ENST00000527720 EGR3Q06889 387 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 ALKBH1Q13686 389 aaKnown RBP13.92□□□□□ -0.18
USH1C-207ENST00000527720 ZNF671Q8TAW3 534 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 YIPF5Q969M3 257 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 KLHL15Q96M94 604 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 DUSP15Q9H1R2 295 aaPredicted RBP13.92□□□□□ -0.18
USH1C-207ENST00000527720 WDR76Q9H967 626 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 SRA1Q9HD15 236 aaKnown RBP13.92□□□□□ -0.18
USH1C-207ENST00000527720 FGF21Q9NSA1 209 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 ING3Q9NXR8 418 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 COPZ2Q9P299 210 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 MRM2Q9UI43 246 aaKnown RBP13.92□□□□□ -0.18
USH1C-207ENST00000527720 ZNF346Q9UL40 294 aaKnown RBP13.92□□□□□ -0.18
USH1C-207ENST00000527720 SRPK3Q9UPE1 567 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 ARPC4-TTLL3A0A0A6YYG9 625 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 CDC14CA4D256 554 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 C4orf47A7E2U8 309 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 ZNF432O94892 652 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 ABHD16AO95870 558 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 PRKCAP17252 672 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 BCKDHBP21953 392 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 GRPRP30550 384 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 CENPAP49450 140 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 POLR2HP52434 150 aaKnown RBP13.92□□□□□ -0.18
USH1C-207ENST00000527720 AGFG1P52594 562 aaKnown RBP13.92□□□□□ -0.18
USH1C-207ENST00000527720 CD83Q01151 205 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 SGCBQ16585 318 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 NTRK2Q16620 822 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 Q499Y3 187 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 C5orf46Q6UWT4 87 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 SYT9Q86SS6 491 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 OR6V1Q8N148 313 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 TOMM5Q8N4H5 51 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 YIPF7Q8N8F6 280 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 OR4D9Q8NGE8 314 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 OR5AK2Q8NH90 309 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 MAP6Q96JE9 813 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 KLHDC3Q9BQ90 382 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 TGIF2Q9GZN2 237 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 LAMP5Q9UJQ1 280 aa13.92□□□□□ -0.18
USH1C-207ENST00000527720 A0A1B0GVC2 190 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 A6NIN4 97 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 IFITM5A6NNB3 132 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 IDSB3KWA1 339 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 FADS1O60427 444 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 NUDT14O95848 222 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 GIMD1P0DJR0 217 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 ERP29P30040 261 aaKnown RBP13.91□□□□□ -0.18
USH1C-207ENST00000527720 BTCP35070 178 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 LIPNQ5VXI9 398 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 LGALS14Q8TCE9 139 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 RGP1Q92546 391 aaPredicted RBP13.91□□□□□ -0.18
USH1C-207ENST00000527720 AKAP1Q92667 903 aaKnown RBP eCLIP13.91□□□□□ -0.18
USH1C-207ENST00000527720 SLITRK2Q9H156 845 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 DPAGT1Q9H3H5 408 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 TAS2R5Q9NYW4 299 aa13.91□□□□□ -0.18
USH1C-207ENST00000527720 ARID1BQ8NFD5 2236 aaPredicted RBP13.91□□□□□ -0.18
USH1C-207ENST00000527720 OR6C70A6NIJ9 312 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 DCTN6O00399 190 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 XKRYO14609 159 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 DHFRP00374 187 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 OR8G3PP0DMU2 310 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 ALOX5APP20292 161 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 EVI2BP34910 448 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 BLVRAP53004 296 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 TOMM34Q15785 309 aaPredicted RBP13.9□□□□□ -0.18
USH1C-207ENST00000527720 FAM69AQ5T7M9 428 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 KRT74Q7RTS7 529 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 MISPQ8IVT2 679 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 DTX3Q8N9I9 347 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 ASCC1Q8N9N2 400 aaKnown RBP13.9□□□□□ -0.18
USH1C-207ENST00000527720 INTS14Q96SY0 518 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 NIPAL2Q9H841 368 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 KLHDC2Q9Y2U9 406 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 NUBP2Q9Y5Y2 271 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 V9GY05 133 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 TRBV5-5A0A0J9YX44 114 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 A8MVM7 634 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 PSMD9O00233 223 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 NPIPB7O75200 414 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 DYRK1AQ13627 763 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 C1orf189Q5VU69 101 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 GRINAQ7Z429 371 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 STK35Q8TDR2 534 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 SMIM4Q8WVI0 70 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 CLDN23Q96B33 292 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 GFI1Q99684 422 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 PTDSS2Q9BVG9 487 aa13.9□□□□□ -0.18
USH1C-207ENST00000527720 ZNF275Q9NSD4 429 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms