RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 GLRA4Q5JXX5 417 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 TREML2Q5T2D2 321 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 AKR1C8PQ5T2L2 129 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 MARC1Q5VT66 337 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 LRRC38Q5VT99 294 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 LIPKQ5VXJ0 399 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 RNLSQ5VYX0 342 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ATG9BQ674R7 924 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 NCR3LG1Q68D85 454 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF660Q6AZW8 331 aaPredicted RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 CXorf57Q6NSI4 855 aaKnown RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 USP17L6PQ6QN14 398 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ALKAL2Q6UX46 152 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 GSG1LQ6UXU4 331 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 WDR88Q6ZMY6 472 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 DPY19L2P2Q6ZN68 376 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF620Q6ZNG0 422 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 Q6ZTC4 211 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ASB18Q6ZVZ8 466 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 TMUB2Q71RG4 321 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 TCF24Q7RTU0 167 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ABHD12BQ7Z5M8 362 aaPredicted RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 OAFQ86UD1 273 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 KMT5CQ86Y97 462 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 DENND1CQ8IV53 801 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 MFSD6LQ8IWD5 586 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 LAX1Q8IWV1 398 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 CNTN4Q8IWV2 1026 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC34A3Q8N130 599 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 DAW1Q8N136 415 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 PELI3Q8N2H9 469 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 SPICQ8N5J4 248 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 MYCT1Q8N699 235 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 CLDN22Q8N7P3 220 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 OR9Q2Q8NGE9 314 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 OR5L2Q8NGL0 311 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 OR9A4Q8NGU2 314 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2T35Q8NGX2 323 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 OR10K1Q8NGX5 313 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 OR4C6Q8NH72 309 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF596Q8TC21 504 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 M1APQ8TC57 530 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM110BQ8TC76 370 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 RNASEH2CQ8TDP1 164 aaKnown RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 CSGALNACT1Q8TDX6 532 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ORAOV1Q8WV07 137 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM234Q8WY98 164 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 MRPS31Q92665 395 aaKnown RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 FBXO32Q969P5 355 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 PSMG2Q969U7 264 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 MRGPRFQ96AM1 343 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 PHYHIPLQ96FC7 376 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ELMOD3Q96FG2 381 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM19Q96HH6 336 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 IGSF21Q96ID5 467 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 STACQ99469 402 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 P2RX7Q99572 595 aaKnown RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 NIPSNAP1Q9BPW8 284 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 AIF1LQ9BQI0 150 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 VPS25Q9BRG1 176 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 THAP7Q9BT49 309 aaPredicted RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 MSTO1Q9BUK6 570 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 FICDQ9BVA6 458 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ACTR3CQ9C0K3 210 aaPredicted RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 WWTR1Q9GZV5 400 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 TKTL2Q9H0I9 626 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 GABARAPL1Q9H0R8 117 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 HIPK2Q9H2X6 1198 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 LPAR2Q9HBW0 351 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 AGO4Q9HCK5 861 aaKnown RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 DNAJC4Q9NNZ3 241 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ISYNA1Q9NPH2 558 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 EXOSC3Q9NQT5 275 aaKnown RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ZCCHC3Q9NUD5 404 aaKnown RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 C2orf42Q9NWW7 574 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 DDIT4Q9NX09 232 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 LRFN1Q9P244 771 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 KLHL8Q9P2G9 620 aaPredicted RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 PEF1Q9UBV8 284 aaKnown RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 IL20RAQ9UHF4 553 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 LEF1Q9UJU2 399 aaPredicted RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 TSPAN16Q9UKR8 245 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ICKQ9UPZ9 632 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 TMED3Q9Y3Q3 217 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 ORC6Q9Y5N6 252 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 TEX264Q9Y6I9 313 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 SIPA1L3O60292 1781 aaPredicted RBP3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 NHSL1Q5SYE7 1610 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 DOCK5Q9H7D0 1870 aa3.37□□□□□ -1.87
CLNS1A-209ENST00000527299 SHANK3Q9BYB0 1731 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM269A0A1B0GVZ9 245 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 A0A1W2PPH5 198 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 C20orf202A1L168 122 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 CD8B2A6NJW9 211 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM159BA6NKW6 160 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 A6NLC8 198 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 B9A039 149 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 E9PQ18 207 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF670-ZNF695F2Z2N8 137 aa3.36□□□□□ -1.87
CLNS1A-209ENST00000527299 NME4O00746 187 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms