RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 PRKACGP22612 351 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 TIMP3P35625 211 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 PPP2R2BQ00005 443 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 TRIP10Q15642 601 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 H1FNTQ75WM6 255 aaPredicted RBP15.35■□□□□ 0.05
CCS-204ENST00000526066 HIST3H2AQ7L7L0 130 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 LRRC17Q8N6Y2 441 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 ATG16L2Q8NAA4 619 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 OR5J2Q8NH18 312 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 ZNF417Q8TAU3 575 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 HIST1H2ACQ93077 130 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 EME1Q96AY2 570 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 DNAJA3Q96EY1 480 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 ZNF845Q96IR2 970 aaPredicted RBP15.35■□□□□ 0.05
CCS-204ENST00000526066 ZNF587Q96SQ5 575 aaPredicted RBP15.35■□□□□ 0.05
CCS-204ENST00000526066 CIB1Q99828 191 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 RBM4BQ9BQ04 359 aaKnown RBP15.35■□□□□ 0.05
CCS-204ENST00000526066 RBM4Q9BWF3 364 aaKnown RBP15.35■□□□□ 0.05
CCS-204ENST00000526066 ZNF556Q9HAH1 456 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 USE1Q9NZ43 259 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 MCTS1Q9ULC4 181 aaKnown RBP15.35■□□□□ 0.05
CCS-204ENST00000526066 HIF3AQ9Y2N7 669 aa15.35■□□□□ 0.05
CCS-204ENST00000526066 UNC119BA6NIH7 251 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 CD8B2A6NJW9 211 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 CLCA1A8K7I4 914 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 PDLIM1O00151 329 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 SMAD9O15198 467 aaKnown RBP15.34■□□□□ 0.05
CCS-204ENST00000526066 ARHGEF9O43307 516 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 CEACAM8P31997 349 aaPredicted RBP15.34■□□□□ 0.05
CCS-204ENST00000526066 P2RY4P51582 365 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 RPS4XP62701 263 aaKnown RBP15.34■□□□□ 0.05
CCS-204ENST00000526066 SORDQ00796 357 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 PMS2P3Q13401 168 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 OTUD3Q5T2D3 398 aaPredicted RBP15.34■□□□□ 0.05
CCS-204ENST00000526066 KDM4DQ6B0I6 523 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 RASSF6Q6ZTQ3 369 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 SEM1Q6ZVN7 128 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 NANOGNBQ7Z5D8 188 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 OAFQ86UD1 273 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 MEX3DQ86XN8 651 aaKnown RBP15.34■□□□□ 0.05
CCS-204ENST00000526066 NAXEQ8NCW5 288 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 NIPSNAP1Q9BPW8 284 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 CALHM2Q9HA72 323 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 FANCFQ9NPI8 374 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 BEX4Q9NWD9 120 aaPredicted RBP15.34■□□□□ 0.05
CCS-204ENST00000526066 CLCF1Q9UBD9 225 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 SIGLEC7Q9Y286 467 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 MPDZO75970 2070 aa15.34■□□□□ 0.05
CCS-204ENST00000526066 LOC102725191A0A1B0GVB3 256 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 PLPP3O14495 311 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 PTP4A3O75365 173 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 AKR7A3O95154 331 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 VAMP5O95183 116 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 HPRP00739 348 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 FCGR2AP12318 317 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 OPRM1P35372 400 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 DAPP51397 102 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 ZP4Q12836 540 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 FHL1Q13642 323 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 DAG1Q14118 895 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 PON3Q15166 354 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 ZBED5Q49AG3 693 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 OGFRL1Q5TC84 451 aaPredicted RBP15.33■□□□□ 0.04
CCS-204ENST00000526066 SHEQ5VZ18 495 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 NSUN5P2Q63ZY6 315 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 RPL13AP3Q6NVV1 102 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 ZBTB49Q6ZSB9 765 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 SLC43A2Q8N370 569 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 PARP8Q8N3A8 854 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 CBR4Q8N4T8 237 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 CLDN22Q8N7P3 220 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 TMEM99Q8N816 258 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 OR13C2Q8NGS9 318 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 WNT2BQ93097 391 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 GTPBP3Q969Y2 492 aaKnown RBP15.33■□□□□ 0.04
CCS-204ENST00000526066 TRIB1Q96RU8 372 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 SMURF2Q9HAU4 748 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 KIF17Q9P2E2 1029 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 RASD1Q9Y272 281 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 POFUT2Q9Y2G5 429 aa15.33■□□□□ 0.04
CCS-204ENST00000526066 HRNRQ86YZ3 2850 aaPredicted RBP15.33■□□□□ 0.04
CCS-204ENST00000526066 A0A1W2PNV4 684 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 SLC22A20A6NK97 555 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 ZNF814B7Z6K7 855 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 EI24O14681 340 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 CYTIPO60759 359 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 RCBTB2O95199 551 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 ALPLP05186 524 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 POU2F1P14859 743 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 CTSSP25774 331 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 PEX2P28328 305 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 ALDH3A2P51648 485 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 PRPS1P60891 318 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 NKX6-1P78426 367 aaPredicted RBP15.32■□□□□ 0.04
CCS-204ENST00000526066 PUDPQ08623 228 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 PDK3Q15120 406 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 POU4F3Q15319 338 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 TAF11Q15544 211 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 ABLIM2Q6H8Q1 611 aa15.32■□□□□ 0.04
CCS-204ENST00000526066 PPP4R4Q6NUP7 873 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms