RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 SEPHS2Q99611 448 aa8.96□□□□□ -0.98
VPS28-204ENST00000526054 C12orf49Q9H741 205 aa8.96□□□□□ -0.98
VPS28-204ENST00000526054 FKRPQ9H9S5 495 aa8.96□□□□□ -0.98
VPS28-204ENST00000526054 NANSQ9NR45 359 aa8.96□□□□□ -0.98
VPS28-204ENST00000526054 PLSCR4Q9NRQ2 329 aa8.96□□□□□ -0.98
VPS28-204ENST00000526054 MRPL39Q9NYK5 338 aaKnown RBP8.96□□□□□ -0.98
VPS28-204ENST00000526054 NDUFAF4Q9P032 175 aa8.96□□□□□ -0.98
VPS28-204ENST00000526054 RHCGQ9UBD6 479 aa8.96□□□□□ -0.98
VPS28-204ENST00000526054 ING1Q9UK53 422 aaPredicted RBP8.96□□□□□ -0.98
VPS28-204ENST00000526054 NOSIPQ9Y314 301 aaKnown RBP8.96□□□□□ -0.98
VPS28-204ENST00000526054 FLVCR1Q9Y5Y0 555 aa8.96□□□□□ -0.98
VPS28-204ENST00000526054 RTTNQ86VV8 2226 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 TCRBV5S2A0A599 114 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 H0YHG0 523 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 ACOT8O14734 319 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 FFAR1O14842 300 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 AKAP8O43823 692 aaKnown RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 MRPL33O75394 65 aaKnown RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 PRSS23O95084 383 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 OR6A2O95222 327 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 CNOT4O95628 575 aaKnown RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 CH25HO95992 272 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 ZNF43P17038 809 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 HOXB6P17509 224 aaKnown RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 CBLP22681 906 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 OR3A2P47893 321 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 P2RY4P51582 365 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 PPP2R2BQ00005 443 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 SPIBQ01892 262 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 PMS2P3Q13401 168 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 C1DQ13901 141 aaKnown RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 SLC17A1Q14916 467 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 FGD3Q5JSP0 725 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 CASP12Q6UXS9 341 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 TFAP2EQ6VUC0 442 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 STAC2Q6ZMT1 411 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 ZNF730Q6ZMV8 503 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 BEND4Q6ZU67 534 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 RRM2BQ7LG56 351 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 PIWIL3Q7Z3Z3 882 aaKnown RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 NUFIP2Q7Z417 695 aaKnown RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 NANOGNBQ7Z5D8 188 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 WFDC8Q8IUA0 241 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 ZDHHC21Q8IVQ6 265 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 ZNF100Q8IYN0 542 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 RNF113BQ8IZP6 322 aaKnown RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 OR5J2Q8NH18 312 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 PFN4Q8NHR9 129 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 ACOT11Q8WXI4 607 aaPredicted RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 TMEM45BQ96B21 275 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 APH1AQ96BI3 265 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 PLPPR2Q96GM1 343 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 OXGR1Q96P68 337 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 MOGAT1Q96PD6 335 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 ZNF347Q96SE7 839 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 ACTR6Q9GZN1 396 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 CXorf56Q9H5V9 222 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 NMNAT1Q9HAN9 279 aaPredicted RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 IL1RAPQ9NPH3 570 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 KRCC1Q9NPI7 259 aaPredicted RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 MEPEQ9NQ76 525 aaPredicted RBP8.95□□□□□ -0.98
VPS28-204ENST00000526054 MAN2C1Q9NTJ4 1040 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 PARPBPQ9NWS1 579 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 ZNF229Q9UJW7 825 aa8.95□□□□□ -0.98
VPS28-204ENST00000526054 A0A1W2PRQ8 180 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 INAFM1C9JVW0 142 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 LRRN3E7EW58 273 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 HS3ST1O14792 307 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 KLF4O43474 513 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 OR7A10O76100 309 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 DIRAS1O95057 198 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 GADD45GO95257 159 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 IFI30P13284 250 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 PUDPQ08623 228 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 DGCR6Q14129 220 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 MBOAT2Q6ZWT7 520 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 SLC46A3Q7Z3Q1 461 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 TSEN54Q7Z6J9 526 aaKnown RBP8.94□□□□□ -0.98
VPS28-204ENST00000526054 SPATA24Q86W54 205 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 PRIMA1Q86XR5 153 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 UEVLDQ8IX04 471 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 NRMQ8IXM6 262 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 CDK20Q8IZL9 346 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 UTP4Q969X6 686 aaKnown RBP8.94□□□□□ -0.98
VPS28-204ENST00000526054 ZNF775Q96BV0 537 aaPredicted RBP8.94□□□□□ -0.98
VPS28-204ENST00000526054 DHRS1Q96LJ7 313 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 SEC14L4Q9UDX3 406 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 SLC7A8Q9UHI5 535 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 AURKCQ9UQB9 309 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 POMPQ9Y244 141 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 TMEM5Q9Y2B1 443 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 NOX1Q9Y5S8 564 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 ROS1P08922 2347 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 CSPG4Q6UVK1 2322 aa8.94□□□□□ -0.98
VPS28-204ENST00000526054 HIVEP2P31629 2446 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 A0A087WUU8 490 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 LOC102725191A0A1B0GVB3 256 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 DHRS12A0PJE2 317 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 PLPP3O14495 311 aa8.93□□□□□ -0.98
VPS28-204ENST00000526054 PIP5K1CO60331 668 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms