RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 PNPLA2Q96AD5 504 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF578Q96N58 590 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-202ENST00000524773 ELF4Q99607 663 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-202ENST00000524773 TMEM185BQ9H7F4 350 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 GPN1Q9HCN4 374 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-202ENST00000524773 FRRS1LQ9P0K9 344 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF281Q9Y2X9 895 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 D6RAR5 112 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 HCRTR1O43613 425 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 CTNSO60931 367 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 ECDO95905 644 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-202ENST00000524773 CD53P19397 219 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 CMPK1P30085 196 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 CDKN2AP42771 156 aaKnown RBP12.02□□□□□ -0.49
CAPN1-202ENST00000524773 TMEM31Q5JXX7 168 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 POMZP3Q6PJE2 187 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 SLC36A1Q7Z2H8 476 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 DND1Q8IYX4 353 aaKnown RBP12.02□□□□□ -0.49
CAPN1-202ENST00000524773 RNF113BQ8IZP6 322 aaKnown RBP12.02□□□□□ -0.49
CAPN1-202ENST00000524773 FRMD1Q8N878 549 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 NPEPL1Q8NDH3 523 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 PATE1Q8WXA2 126 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 LCORQ96JN0 433 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-202ENST00000524773 KLHDC3Q9BQ90 382 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 LDAHQ9H6V9 325 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 EXO5Q9H790 373 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 ACSL5Q9ULC5 683 aa12.02□□□□□ -0.49
CAPN1-202ENST00000524773 UBE2QL1A1L167 161 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 C17orf51A8MQB3 221 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 AQP2P41181 271 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 AP3S2P59780 193 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 ERV3-1Q14264 604 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 CEBPEQ15744 281 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 PRRT3Q5FWE3 981 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 ARHGAP11AQ6P4F7 1023 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 BPIFCQ8NFQ6 507 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 OR52R1Q8NGF1 315 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF416Q9BWM5 594 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF768Q9H5H4 540 aaKnown RBP12.01□□□□□ -0.49
CAPN1-202ENST00000524773 FGF22Q9HCT0 170 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 TAS2R3Q9NYW6 316 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 FBXL3Q9UKT7 428 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 DAPP1Q9UN19 280 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 KRBOX1C9JBD0 128 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 B3GALNT1O75752 331 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 ANXA2P07355 339 aaKnown RBP12.01□□□□□ -0.49
CAPN1-202ENST00000524773 ACAA2P42765 397 aaKnown RBP12.01□□□□□ -0.49
CAPN1-202ENST00000524773 LUMP51884 338 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-202ENST00000524773 SEC13P55735 322 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 DLX5P56178 289 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 ACTA2P62736 377 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 ACTG2P63267 376 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 HTRA4P83105 476 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-202ENST00000524773 DEFB110Q30KQ9 67 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 AGBL4Q5VU57 503 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 TSSK4Q6SA08 328 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 CDH26Q8IXH8 852 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 HAVCR1Q96D42 359 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 POFUT1Q9H488 388 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 PLEKHA1Q9HB21 404 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 MED11Q9P086 117 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 ICAM5Q9UMF0 924 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 FARSAQ9Y285 508 aaKnown RBP12.01□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF337Q9Y3M9 751 aa12.01□□□□□ -0.49
CAPN1-202ENST00000524773 ACOT7O00154 380 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 GPR31O00270 319 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 RBBP9O75884 186 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 DIO1P49895 249 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 GAB4Q2WGN9 574 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 ELFN2Q5R3F8 820 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 OR10K2Q6IF99 312 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF425Q6IV72 752 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 ETFBKMTQ8IXQ9 262 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 OR14A16Q8NHC5 309 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 TMEM106AQ96A25 262 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 ADAD1Q96M93 576 aaKnown RBP12□□□□□ -0.49
CAPN1-202ENST00000524773 DPYSL5Q9BPU6 564 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 ALG12Q9BV10 488 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 WDR76Q9H967 626 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 MYO9BQ13459 2157 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 TRANK1O15050 2925 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 FAM25EA8MYX2 175 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 ADH1CP00326 375 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 THBS1P07996 1170 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 CPN1P15169 458 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 CCR4P51679 360 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 PPP1CAP62136 330 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 DHODHQ02127 395 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 VITQ6UXI7 678 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 UNQ9370/PRO34162Q6UXP9 181 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 PLPP7Q8NBV4 271 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 OR5M9Q8NGP3 310 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 AMELYQ99218 206 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 PCDHB16Q9NRJ7 776 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 HAO2Q9NYQ3 351 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 MRM2Q9UI43 246 aaKnown RBP12□□□□□ -0.49
CAPN1-202ENST00000524773 C19orf53Q9UNZ5 99 aaPredicted RBP12□□□□□ -0.49
CAPN1-202ENST00000524773 PTPRSQ13332 1948 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 TICRRQ7Z2Z1 1910 aa12□□□□□ -0.49
CAPN1-202ENST00000524773 CNTRLQ7Z7A1 2325 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms