RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SERTAD2Q14140 314 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CAPRIN1Q14444 709 aaKnown RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 DUSP5Q16690 384 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CT45A2Q5DJT8 189 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 LRIF1Q5T3J3 769 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CPTPQ5TA50 214 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 SAXO2Q658L1 398 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 REP15Q6BDI9 236 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 SLC35E4Q6ICL7 350 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 DLEU7Q6UYE1 221 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 TMEM64Q6YI46 380 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CPLX4Q7Z7G2 160 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 HMGN2P46Q86SG4 172 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 GALNT10Q86SR1 603 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 SNX32Q86XE0 403 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 RAB43Q86YS6 212 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 APLFQ8IW19 511 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 PRR22Q8IZ63 422 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 FAM9CQ8IZT9 166 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 KIRREL3Q8IZU9 778 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 OR2L13Q8N349 312 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 MORN4Q8NDC4 146 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 B3GNT7Q8NFL0 401 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 OR2AK2Q8NG84 335 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 OR5D16Q8NGK9 328 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 OR4A15Q8NGL6 344 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 M1APQ8TC57 530 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 PNPT1Q8TCS8 783 aaKnown RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ZFP90Q8TF47 636 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 METTL21AQ8WXB1 218 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 PIK3R3Q92569 461 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 RIT1Q92963 219 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 KIAA1143Q96AT1 154 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF524Q96C55 264 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 NTNG2Q96CW9 530 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 RCN3Q96D15 328 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ERP27Q96DN0 273 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 SPDL1Q96EA4 605 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ELP4Q96EB1 424 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ARSGQ96EG1 525 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 SENP5Q96HI0 755 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 MAGED4Q96JG8 741 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 COG8Q96MW5 612 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 VSTM2LQ96N03 204 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CCDC115Q96NT0 180 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 SIGLEC12Q96PQ1 595 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 OR52E6Q96RD3 313 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 BBS4Q96RK4 519 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 LPAR4Q99677 370 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 KLHDC3Q9BQ90 382 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 SIKE1Q9BRV8 207 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 FAIM2Q9BWQ8 316 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 HES7Q9BYE0 225 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 RTN4RQ9BZR6 473 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 OR8D2Q9GZM6 311 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ING2Q9H160 280 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 NXF5Q9H1B4 397 aaKnown RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 KCNN2Q9H2S1 579 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 WDR41Q9HAD4 459 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 FOLH1BQ9HBA9 442 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 PROK2Q9HC23 129 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 MMP25Q9NPA2 562 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 MIEF1Q9NQG6 463 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 PFDN4Q9NQP4 134 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ACSS1Q9NUB1 689 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 TAS2R9Q9NYW1 312 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 FLRT3Q9NZU0 649 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 VAPAQ9P0L0 249 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 BTNL2Q9UIR0 455 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 FBXO9Q9UK97 447 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 FAF1Q9UNN5 650 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ENTPD4Q9Y227 616 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 MRPS33Q9Y291 106 aaKnown RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 PADI2Q9Y2J8 665 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF780BQ9Y6R6 833 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 SPACA6W5XKT8 324 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 NCOA6Q14686 2063 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 HIVEP3Q5T1R4 2406 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CELSR2Q9HCU4 2923 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 UBR4Q5T4S7 5183 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 RYR3Q15413 4870 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 NBASA2RRP1 2371 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 MYO7BQ6PIF6 2116 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NPIPA5A0A0B4J1W7 369 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 A0A0G2JMM0 328 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 RNF103-CHMP3A0A140T963 221 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 PRSS51A0A1B0GVH4 220 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 C2orf92A0A1B0GVN3 265 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 A0A1W2PP18 115 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 A0A1W2PPB8 328 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 A0A1W2PRS3 328 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 PINLYPA6NC86 204 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 TMEM8BA6NDV4 472 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 KIR3DP1A8MWS1 328 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 TEX22C9J3V5 150 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NPIPA7E9PJI5 369 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 BLOC1S5-TXNDC5H3BN57 136 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 NME4O00746 187 aa2.62□□□□□ -1.99
CSDE1-208ENST00000524652 RFXANKO14593 260 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms