RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 LPAR2Q9HBW0 351 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 KLHL14Q9P2G3 628 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 DYSFO75923 2080 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 TRAV36DV7A0A075B6V5 113 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 ZNF99A8MXY4 864 aaPredicted RBP13.31□□□□□ -0.28
MRPS28-209ENST00000522987 SLCO1B7G3V0H7 640 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 ERCC1P07992 297 aaPredicted RBP13.31□□□□□ -0.28
MRPS28-209ENST00000522987 ARAFP10398 606 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 B4GALT1P15291 398 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 HOXB9P17482 250 aaPredicted RBP13.31□□□□□ -0.28
MRPS28-209ENST00000522987 ARR3P36575 388 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 CHN2P52757 468 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 NCALDP61601 193 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 ZSWIM7Q19AV6 140 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 ALKBH6Q3KRA9 238 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 C3orf36Q3SXR2 165 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 ZNF813Q6ZN06 617 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 MSANTD1Q6ZTZ1 278 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 LRP11Q86VZ4 500 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 GOLGA6L1Q8N7Z2 621 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 ZNF540Q8NDQ6 660 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 NEU4Q8WWR8 484 aaPredicted RBP13.31□□□□□ -0.28
MRPS28-209ENST00000522987 ANKRD27Q96NW4 1050 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 BCL2L10Q9HD36 194 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 THUMPD1Q9NXG2 353 aaKnown RBP13.31□□□□□ -0.28
MRPS28-209ENST00000522987 NKIRAS1Q9NYS0 192 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 USP22Q9UPT9 525 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 CMAHPQ9Y471 501 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 USH1CQ9Y6N9 552 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 NBEAL1Q6ZS30 2694 aa13.31□□□□□ -0.28
MRPS28-209ENST00000522987 VSTM5A8MXK1 200 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 C11orf98E9PRG8 122 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 AKAP8O43823 692 aaKnown RBP13.3□□□□□ -0.28
MRPS28-209ENST00000522987 OR2T1O43869 369 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 RGS9O75916 674 aaPredicted RBP13.3□□□□□ -0.28
MRPS28-209ENST00000522987 BGLAPP02818 100 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 C8BP07358 591 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 PATE4P0C8F1 98 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 HOXB1P14653 301 aaPredicted RBP13.3□□□□□ -0.28
MRPS28-209ENST00000522987 ITGA2P17301 1181 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 GIFP27352 417 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 ALDH3B1P43353 468 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 PTDSS1P48651 473 aaKnown RBP13.3□□□□□ -0.28
MRPS28-209ENST00000522987 SEC24CP53992 1094 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 RGS8P57771 180 aaPredicted RBP13.3□□□□□ -0.28
MRPS28-209ENST00000522987 CDK6Q00534 326 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 PMS2P3Q13401 168 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 MFSD13AQ14CX5 517 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 GSG1Q2KHT4 349 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 PAGE3Q5JUK9 113 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 C6orf89Q6UWU4 347 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 C20orf196Q8IYI0 205 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 ZNF786Q8N393 782 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 OR6N1Q8NGY5 312 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 ZNF317Q96PQ6 595 aaPredicted RBP13.3□□□□□ -0.28
MRPS28-209ENST00000522987 RAD21L1Q9H4I0 556 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 IKZF5Q9H5V7 419 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 CCDC167Q9P0B6 97 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 MYEF2Q9P2K5 600 aaKnown RBP13.3□□□□□ -0.28
MRPS28-209ENST00000522987 TMEFF2Q9UIK5 374 aaPredicted RBP13.3□□□□□ -0.28
MRPS28-209ENST00000522987 RAB21Q9UL25 225 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 POFUT2Q9Y2G5 429 aa13.3□□□□□ -0.28
MRPS28-209ENST00000522987 ARHGAP32A7KAX9 2087 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 A0A087WUJ7 227 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 TPST2O60704 377 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 BMP2P12643 396 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 NR4A1P22736 598 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 AHCYP23526 432 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 PRKAR1BP31321 381 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 STX1BP61266 288 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 FADDQ13158 208 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 SQLEQ14534 574 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 OR1Q1Q15612 314 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 REEP3Q6NUK4 255 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 FUNDC1Q8IVP5 155 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 FAM169BQ8N8A8 192 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 LINC01356Q8N9X3 169 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 SLC47A1Q96FL8 570 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 EBF4Q9BQW3 602 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 ASPNQ9BXN1 380 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 ULBP2Q9BZM5 246 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 OR51B6Q9H340 312 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 B3GNT2Q9NY97 397 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 SELENONQ9NZV5 590 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 VAPAQ9P0L0 249 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.29□□□□□ -0.28
MRPS28-209ENST00000522987 NOX1Q9Y5S8 564 aa13.29□□□□□ -0.28
MRPS28-209ENST00000522987 M0R3H8 397 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 WNT9BO14905 357 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 HPXP02790 462 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 OPN1SWP03999 348 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 TACSTD2P09758 323 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 ETS2P15036 469 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 PAX7P23759 505 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 COL8A2P25067 703 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 THBS2P35442 1172 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 GIPRP48546 466 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 CDH12P55289 794 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 CDH15P55291 814 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 RIN1Q13671 783 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms