RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 A0A1B0GTI1 187 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 BCLAF3A2AJT9 711 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 OR5K4A6NMS3 321 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 PP2D1A8MPX8 630 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 GOLGA8KD6RF30 607 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 E5RJQ4 531 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 C11orf98E9PRG8 122 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 SLC9A3R1O14745 358 aaPredicted RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 SGCEO43556 437 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 UGT2B17O75795 530 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 VAMP5O95183 116 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 GOLGA8HP0CJ92 632 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 SLC35E2P0CK97 266 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 LIFP15018 202 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 ZNF7P17097 686 aaPredicted RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 GPR183P32249 361 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 CLDN6P56747 220 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 FBXW4P57775 412 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 VSNL1P62760 191 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 GLO1Q04760 184 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 FOXF2Q12947 444 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 DAZAP2Q15038 168 aaPredicted RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 SF3A2Q15428 464 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 SGCAQ16586 387 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 ATP6V1FQ16864 119 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 FFAR4Q5NUL3 377 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 HECTD2Q5U5R9 776 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 IRAK1BP1Q5VVH5 260 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 C8orf82Q6P1X6 216 aaPredicted RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 USP50Q70EL3 339 aaPredicted RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 AHSA2Q719I0 299 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 CEACAM19Q7Z692 300 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 CMC1Q7Z7K0 106 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 LIX1Q8N485 282 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 IQCF1Q8N6M8 205 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 ZNF441Q8N8Z8 693 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 MDS2Q8NDY4 140 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 ZNF738Q8NE65 137 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 OR9Q2Q8NGE9 314 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 OR4D10Q8NGI6 311 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 OR2L2Q8NH16 312 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 OR51F2Q8NH61 342 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 PHF10Q8WUB8 498 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 OR8D1Q8WZ84 308 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 GTF3AQ92664 365 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 MRPS31Q92665 395 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 CPNE4Q96A23 557 aaPredicted RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 SERPINB12Q96P63 405 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 MS4A4EQ96PG1 132 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 NKX3-1Q99801 234 aaPredicted RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 MICU1Q9BPX6 476 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 FAM173AQ9BQD7 235 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 CABLES2Q9BTV7 478 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 ZNF426Q9BUY5 554 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 DUSP26Q9BV47 211 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 FAIM2Q9BWQ8 316 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 TMEM59Q9BXS4 323 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 ELOVL4Q9GZR5 314 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 OR51V1Q9H2C8 321 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 FOLH1BQ9HBA9 442 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 EML4Q9HC35 981 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 HRASLS2Q9NWW9 162 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 TUBA8Q9NY65 449 aaPredicted RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 USE1Q9NZ43 259 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 CCDC59Q9P031 241 aaKnown RBP3.39□□□□□ -1.87
SKP1-209ENST00000522552 NTNG1Q9Y2I2 539 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 AUP1Q9Y679 476 aa3.39□□□□□ -1.87
SKP1-209ENST00000522552 CGNL1Q0VF96 1302 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 CNTNAP1P78357 1384 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 PLEKHH1Q9ULM0 1364 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 A0A1B0GTH9 108 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 TVP23AA6NH52 213 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 LRRN3E7EW58 273 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 hCG_2039718K7EN88 272 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 SULT1C2O00338 296 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 DCTN6O00399 190 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 TNFRSF13BO14836 293 aaPredicted RBP3.38□□□□□ -1.87
SKP1-209ENST00000522552 SURF4O15260 269 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 INPP4BO15327 924 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 MPDU1O75352 247 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 CLIC3O95833 236 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 OXTP01178 125 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 IFNA6P05013 189 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 LGALS2P05162 132 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 TNFRSF1BP20333 461 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 MPGP29372 298 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 OR1E1P30953 314 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 COILP38432 576 aaPredicted RBP3.38□□□□□ -1.87
SKP1-209ENST00000522552 DDOSTP39656 456 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 DNASE1L1P49184 302 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 CEBPGP53567 150 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 AP3S2P59780 193 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 MAGOHP61326 146 aaKnown RBP3.38□□□□□ -1.87
SKP1-209ENST00000522552 REEP5Q00765 189 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 DPYSL3Q14195 570 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 P2RY6Q15077 328 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 C5orf64Q2M2E5 130 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 C10orf25Q5T742 122 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 OR2G6Q5TZ20 316 aa3.38□□□□□ -1.87
SKP1-209ENST00000522552 OR52E8Q6IFG1 317 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms