RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 DUSP5Q16690 384 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 CLVS2Q5SYC1 327 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 CMTM1Q8IZ96 169 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 SLC2A12Q8TD20 617 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 NXF2Q9GZY0 626 aaKnown RBP12.75□□□□□ -0.37
SYNPO-205ENST00000522122 OR10A2Q9H208 303 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 ATP13A2Q9NQ11 1180 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 POM121CA8CG34 1229 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 H3BQ06 376 aaPredicted RBP12.75□□□□□ -0.37
SYNPO-205ENST00000522122 EPHA5P54756 1037 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 DPTQ07507 201 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 TECPR1Q7Z6L1 1165 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 SULF2Q8IWU5 870 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 GLYATL2Q8WU03 294 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 HTR2CP28335 458 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 TGM4P49221 684 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 YIF1BQ5BJH7 314 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 CD276Q5ZPR3 534 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 UNQ6126/PRO20091Q6UXV3 157 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 GPR155Q7Z3F1 870 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF695Q8IW36 515 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 GIMAP5Q96F15 307 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 NICN1Q9BSH3 213 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 MUTYHQ9UIF7 546 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 NUP214P35658 2090 aaPredicted RBP12.74□□□□□ -0.37
SYNPO-205ENST00000522122 A0A0D9SG52 128 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 YY2O15391 372 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 CNOT4O95628 575 aaKnown RBP12.74□□□□□ -0.37
SYNPO-205ENST00000522122 NID1P14543 1247 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 ITGB8P26012 769 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 CRYBB2P43320 205 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 MC2RQ01718 297 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 ALKBH1Q13686 389 aaKnown RBP12.74□□□□□ -0.37
SYNPO-205ENST00000522122 BEX5Q5H9J7 111 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 RFPL4BQ6ZWI9 263 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 NXPE3Q969Y0 559 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 SULT4A1Q9BR01 284 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 NXF5Q9H1B4 397 aaKnown RBP12.74□□□□□ -0.37
SYNPO-205ENST00000522122 HINT3Q9NQE9 182 aaKnown RBP12.74□□□□□ -0.37
SYNPO-205ENST00000522122 KCNIP1Q9NZI2 227 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 FBXL2Q9UKC9 423 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 PPIL1Q9Y3C6 166 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 OR51B4Q9Y5P0 310 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 CTNSO60931 367 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 ZFAND5O76080 213 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 PPP3CBP16298 524 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 RPL35P42766 123 aaKnown RBP12.74□□□□□ -0.37
SYNPO-205ENST00000522122 CCR6P51684 374 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 CCR9P51686 369 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 RPS27AP62979 156 aaKnown RBP12.74□□□□□ -0.37
SYNPO-205ENST00000522122 UBA52P62987 128 aaKnown RBP12.74□□□□□ -0.37
SYNPO-205ENST00000522122 CAMK2DQ13557 499 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF77Q15935 545 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 MED25Q71SY5 747 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 NLGN4YQ8NFZ3 816 aaPredicted RBP12.74□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF285Q96NJ3 590 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 ACKR4Q9NPB9 350 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 PLEKHM1Q9Y4G2 1056 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 RP1L1Q8IWN7 2480 aaPredicted RBP12.74□□□□□ -0.37
SYNPO-205ENST00000522122 TTC3P53804 2025 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 LOC285556D6RIA3 1793 aa12.74□□□□□ -0.37
SYNPO-205ENST00000522122 HCRTR1O43613 425 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 CD6P30203 668 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 HMGA2P52926 109 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 GPR176Q14439 515 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 IRF3Q14653 427 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 C10orf111Q8N326 155 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF578Q96N58 590 aaPredicted RBP12.73□□□□□ -0.37
SYNPO-205ENST00000522122 OR5B12Q96R08 314 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 KIR3DX1Q9H7L2 352 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 KCNJ16Q9NPI9 418 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 ANK1P16157 1881 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 FAM230AA0A1W2PPH8 454 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 SUSD5O60279 629 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
SYNPO-205ENST00000522122 TPBGQ13641 420 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 TMEM31Q5JXX7 168 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 VASH1Q7L8A9 365 aaPredicted RBP12.73□□□□□ -0.37
SYNPO-205ENST00000522122 ADIPOR2Q86V24 386 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 OR14A16Q8NHC5 309 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 STACQ99469 402 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 SDF2Q99470 211 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 ARHGAP9Q9BRR9 750 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 NELFAQ9H3P2 528 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 MBNL1Q9NR56 388 aaKnown RBP12.73□□□□□ -0.37
SYNPO-205ENST00000522122 DAPP1Q9UN19 280 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 ETV7Q9Y603 341 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 SRMP19623 302 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 GABRR1P24046 479 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 CLDN6P56747 220 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 FABP5Q01469 135 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 BDH1Q02338 343 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 TNK1Q13470 666 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 TRMT12Q53H54 448 aaKnown RBP12.73□□□□□ -0.37
SYNPO-205ENST00000522122 MANEAQ5SRI9 462 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 C5orf46Q6UWT4 87 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 OR13C9Q8NGT0 318 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 PAQR8Q8TEZ7 354 aa12.73□□□□□ -0.37
SYNPO-205ENST00000522122 SENP5Q96HI0 755 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms